RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 RPL39P62891 51 aaKnown RBP0.69□□□□□ -2.3
SMNDC1-205ENST00000477763 LINC01590Q5TEZ4 76 aa0.69□□□□□ -2.3
SMNDC1-205ENST00000477763 POLR2KP53803 58 aaKnown RBP0.68□□□□□ -2.3
SMNDC1-205ENST00000477763 WFDC10BQ8IUB3 73 aa0.68□□□□□ -2.3
SMNDC1-205ENST00000477763 LEAP2Q969E1 77 aa0.68□□□□□ -2.3
SMNDC1-205ENST00000477763 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
SMNDC1-205ENST00000477763 KAAG1Q9UBP8 84 aa0.67□□□□□ -2.3
SMNDC1-205ENST00000477763 MACF1Q9UPN3 7388 aaKnown RBP0.66□□□□□ -2.3
SMNDC1-205ENST00000477763 H3BUA1 57 aa0.66□□□□□ -2.3
SMNDC1-205ENST00000477763 DEFB135Q30KP9 77 aa0.66□□□□□ -2.3
SMNDC1-205ENST00000477763 IGLV5-48A0A075B6I7 105 aa0.65□□□□□ -2.31
SMNDC1-205ENST00000477763 MMP24-AS1A0A0U1RRL7 71 aa0.65□□□□□ -2.31
SMNDC1-205ENST00000477763 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
SMNDC1-205ENST00000477763 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
SMNDC1-205ENST00000477763 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
SMNDC1-205ENST00000477763 APELAP0DMC3 54 aa0.64□□□□□ -2.31
SMNDC1-205ENST00000477763 HTN3P15516 51 aa0.64□□□□□ -2.31
SMNDC1-205ENST00000477763 DEFB1P60022 68 aa0.64□□□□□ -2.31
SMNDC1-205ENST00000477763 WT1-ASQ06250 92 aa0.64□□□□□ -2.31
SMNDC1-205ENST00000477763 DEFB104AQ8WTQ1 72 aa0.64□□□□□ -2.31
SMNDC1-205ENST00000477763 PRLHP81277 87 aa0.63□□□□□ -2.31
SMNDC1-205ENST00000477763 A8MTW9 85 aa0.62□□□□□ -2.31
SMNDC1-205ENST00000477763 M0R2T5 61 aa0.62□□□□□ -2.31
SMNDC1-205ENST00000477763 KRTAP20-1Q3LI63 56 aa0.62□□□□□ -2.31
SMNDC1-205ENST00000477763 FLGP20930 4061 aaPredicted RBP0.62□□□□□ -2.31
SMNDC1-205ENST00000477763 M0QY20 66 aa0.61□□□□□ -2.31
SMNDC1-205ENST00000477763 DEFB131AP59861 70 aa0.61□□□□□ -2.31
SMNDC1-205ENST00000477763 PRCDQ00LT1 54 aa0.61□□□□□ -2.31
SMNDC1-205ENST00000477763 KRTAP19-2Q3LHN2 52 aa0.61□□□□□ -2.31
SMNDC1-205ENST00000477763 S4R3F8 94 aa0.61□□□□□ -2.31
SMNDC1-205ENST00000477763 MT1HP80294 61 aa0.6□□□□□ -2.31
SMNDC1-205ENST00000477763 RPL39P5Q59GN2 51 aa0.6□□□□□ -2.31
SMNDC1-205ENST00000477763 CLPSL2Q6UWE3 100 aa0.6□□□□□ -2.31
SMNDC1-205ENST00000477763 NOP10Q9NPE3 64 aaKnown RBP0.6□□□□□ -2.31
SMNDC1-205ENST00000477763 A0A096LPF7 62 aa0.59□□□□□ -2.31
SMNDC1-205ENST00000477763 SPART-AS1P0CW21 52 aa0.59□□□□□ -2.31
SMNDC1-205ENST00000477763 TOMM7Q9P0U1 55 aa0.59□□□□□ -2.31
SMNDC1-205ENST00000477763 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
SMNDC1-205ENST00000477763 RHPN1-AS1Q9BWJ2 59 aa0.58□□□□□ -2.32
SMNDC1-205ENST00000477763 HTN1P15515 57 aa0.57□□□□□ -2.32
SMNDC1-205ENST00000477763 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
SMNDC1-205ENST00000477763 K7EIM0 57 aa0.55□□□□□ -2.32
SMNDC1-205ENST00000477763 TMEM167AQ8TBQ9 72 aa0.55□□□□□ -2.32
SMNDC1-205ENST00000477763 KRTAP19-6Q3LI70 58 aa0.54□□□□□ -2.32
SMNDC1-205ENST00000477763 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
SMNDC1-205ENST00000477763 MT2AP02795 61 aa0.53□□□□□ -2.32
SMNDC1-205ENST00000477763 MT1FP04733 61 aa0.53□□□□□ -2.32
SMNDC1-205ENST00000477763 H3BNG1 76 aa0.51□□□□□ -2.33
SMNDC1-205ENST00000477763 PRM1P04553 51 aa0.51□□□□□ -2.33
SMNDC1-205ENST00000477763 A0A096LNI7 61 aa0.5□□□□□ -2.33
SMNDC1-205ENST00000477763 SPRR2EP22531 72 aa0.5□□□□□ -2.33
SMNDC1-205ENST00000477763 SPRR2BP35325 72 aa0.5□□□□□ -2.33
SMNDC1-205ENST00000477763 SPRR2AP35326 72 aa0.5□□□□□ -2.33
SMNDC1-205ENST00000477763 LINC01556Q5JQF7 62 aa0.5□□□□□ -2.33
SMNDC1-205ENST00000477763 C9orf92A6NGG3 77 aa0.49□□□□□ -2.33
SMNDC1-205ENST00000477763 M0QZ58 72 aa0.47□□□□□ -2.33
SMNDC1-205ENST00000477763 SPRR2DP22532 72 aa0.47□□□□□ -2.33
SMNDC1-205ENST00000477763 MT4P47944 62 aa0.47□□□□□ -2.33
SMNDC1-205ENST00000477763 SPRR2FQ96RM1 72 aa0.47□□□□□ -2.33
SMNDC1-205ENST00000477763 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
SMNDC1-205ENST00000477763 MT1BP07438 61 aa0.45□□□□□ -2.34
SMNDC1-205ENST00000477763 TNP1P09430 55 aa0.43□□□□□ -2.34
SMNDC1-205ENST00000477763 KRTAP8-1Q8IUC2 63 aa0.41□□□□□ -2.34
SMNDC1-205ENST00000477763 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.35
SMNDC1-205ENST00000477763 MT1XP80297 61 aa0.39□□□□□ -2.35
SMNDC1-205ENST00000477763 KRTAP19-8Q3LI54 63 aa0.39□□□□□ -2.35
SMNDC1-205ENST00000477763 KRTAP20-2Q3LI61 65 aa0.38□□□□□ -2.35
SMNDC1-205ENST00000477763 KRTAP19-7Q3SYF9 63 aa0.36□□□□□ -2.35
SMNDC1-205ENST00000477763 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
SMNDC1-205ENST00000477763 MT1EP04732 61 aa0.34□□□□□ -2.36
SMNDC1-205ENST00000477763 RPS29P62273 56 aaKnown RBP0.33□□□□□ -2.36
SMNDC1-205ENST00000477763 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
SMNDC1-205ENST00000477763 KRTAP19-5Q3LI72 72 aa0.33□□□□□ -2.36
SMNDC1-205ENST00000477763 MT1MQ8N339 61 aa0.33□□□□□ -2.36
SMNDC1-205ENST00000477763 MT1GP13640 62 aa0.32□□□□□ -2.36
SMNDC1-205ENST00000477763 MT1AP04731 61 aa0.31□□□□□ -2.36
SMNDC1-205ENST00000477763 MT1LQ93083 61 aa0.3□□□□□ -2.36
SMNDC1-205ENST00000477763 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms