RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
SEC13-215ENST00000477547 BRK1Q8WUW1 75 aa5.88□□□□□ -1.47
SEC13-215ENST00000477547 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
SEC13-215ENST00000477547 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
SEC13-215ENST00000477547 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
SEC13-215ENST00000477547 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
SEC13-215ENST00000477547 ROMO1P60602 79 aa5.78□□□□□ -1.48
SEC13-215ENST00000477547 KRTAP19-7Q3SYF9 63 aa5.73□□□□□ -1.49
SEC13-215ENST00000477547 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
SEC13-215ENST00000477547 MT1EP04732 61 aa5.67□□□□□ -1.5
SEC13-215ENST00000477547 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
SEC13-215ENST00000477547 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
SEC13-215ENST00000477547 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
SEC13-215ENST00000477547 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
SEC13-215ENST00000477547 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
SEC13-215ENST00000477547 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
SEC13-215ENST00000477547 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
SEC13-215ENST00000477547 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
SEC13-215ENST00000477547 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
SEC13-215ENST00000477547 MT1LQ93083 61 aa5.48□□□□□ -1.53
SEC13-215ENST00000477547 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
SEC13-215ENST00000477547 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
SEC13-215ENST00000477547 MT1GP13640 62 aa5.42□□□□□ -1.54
SEC13-215ENST00000477547 AHNAK2Q8IVF2 5795 aa5.41□□□□□ -1.54
SEC13-215ENST00000477547 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.54
SEC13-215ENST00000477547 MT1MQ8N339 61 aa5.37□□□□□ -1.55
SEC13-215ENST00000477547 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
SEC13-215ENST00000477547 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
SEC13-215ENST00000477547 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
SEC13-215ENST00000477547 MT4P47944 62 aa5.26□□□□□ -1.57
SEC13-215ENST00000477547 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
SEC13-215ENST00000477547 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
SEC13-215ENST00000477547 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
SEC13-215ENST00000477547 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
SEC13-215ENST00000477547 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
SEC13-215ENST00000477547 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
SEC13-215ENST00000477547 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
SEC13-215ENST00000477547 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
SEC13-215ENST00000477547 H3BS24 57 aa5.1□□□□□ -1.59
SEC13-215ENST00000477547 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
SEC13-215ENST00000477547 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
SEC13-215ENST00000477547 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
SEC13-215ENST00000477547 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
SEC13-215ENST00000477547 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
SEC13-215ENST00000477547 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
SEC13-215ENST00000477547 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
SEC13-215ENST00000477547 MT1AP04731 61 aa4.68□□□□□ -1.66
SEC13-215ENST00000477547 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
SEC13-215ENST00000477547 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
SEC13-215ENST00000477547 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
SEC13-215ENST00000477547 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
SEC13-215ENST00000477547 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
SEC13-215ENST00000477547 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
SEC13-215ENST00000477547 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
SEC13-215ENST00000477547 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
SEC13-215ENST00000477547 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
SEC13-215ENST00000477547 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
SEC13-215ENST00000477547 MT3P25713 68 aa4.23□□□□□ -1.73
SEC13-215ENST00000477547 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
SEC13-215ENST00000477547 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
SEC13-215ENST00000477547 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
SEC13-215ENST00000477547 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
SEC13-215ENST00000477547 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SEC13-215ENST00000477547 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
SEC13-215ENST00000477547 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
SEC13-215ENST00000477547 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SEC13-215ENST00000477547 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
SEC13-215ENST00000477547 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
SEC13-215ENST00000477547 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
SEC13-215ENST00000477547 INE1O15225 51 aa3.2□□□□□ -1.9
SEC13-215ENST00000477547 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SEC13-215ENST00000477547 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SEC13-215ENST00000477547 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
SEC13-215ENST00000477547 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SEC13-215ENST00000477547 PRM1P04553 51 aa3□□□□□ -1.93
SEC13-215ENST00000477547 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
SEC13-215ENST00000477547 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
SEC13-215ENST00000477547 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 154.4 ms