RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
SMIM4-202ENST00000476842 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
SMIM4-202ENST00000476842 MT1GP13640 62 aa6.39□□□□□ -1.39
SMIM4-202ENST00000476842 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
SMIM4-202ENST00000476842 MT1LQ93083 61 aa6.35□□□□□ -1.39
SMIM4-202ENST00000476842 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
SMIM4-202ENST00000476842 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
SMIM4-202ENST00000476842 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
SMIM4-202ENST00000476842 ROMO1P60602 79 aa6.27□□□□□ -1.41
SMIM4-202ENST00000476842 MT1MQ8N339 61 aa6.25□□□□□ -1.41
SMIM4-202ENST00000476842 DSTQ03001 7570 aaKnown RBP6.19□□□□□ -1.42
SMIM4-202ENST00000476842 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
SMIM4-202ENST00000476842 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
SMIM4-202ENST00000476842 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
SMIM4-202ENST00000476842 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
SMIM4-202ENST00000476842 BRK1Q8WUW1 75 aa6□□□□□ -1.45
SMIM4-202ENST00000476842 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
SMIM4-202ENST00000476842 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
SMIM4-202ENST00000476842 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
SMIM4-202ENST00000476842 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
SMIM4-202ENST00000476842 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
SMIM4-202ENST00000476842 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
SMIM4-202ENST00000476842 MT4P47944 62 aa5.72□□□□□ -1.49
SMIM4-202ENST00000476842 KRTAP5-5Q701N2 237 aaPredicted RBP5.72□□□□□ -1.49
SMIM4-202ENST00000476842 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
SMIM4-202ENST00000476842 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
SMIM4-202ENST00000476842 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
SMIM4-202ENST00000476842 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
SMIM4-202ENST00000476842 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
SMIM4-202ENST00000476842 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
SMIM4-202ENST00000476842 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
SMIM4-202ENST00000476842 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
SMIM4-202ENST00000476842 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
SMIM4-202ENST00000476842 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
SMIM4-202ENST00000476842 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
SMIM4-202ENST00000476842 MT1AP04731 61 aa5.41□□□□□ -1.54
SMIM4-202ENST00000476842 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
SMIM4-202ENST00000476842 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SMIM4-202ENST00000476842 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
SMIM4-202ENST00000476842 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
SMIM4-202ENST00000476842 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
SMIM4-202ENST00000476842 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
SMIM4-202ENST00000476842 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
SMIM4-202ENST00000476842 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
SMIM4-202ENST00000476842 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
SMIM4-202ENST00000476842 KRTAP5-7Q6L8G8 165 aa4.98□□□□□ -1.61
SMIM4-202ENST00000476842 MT3P25713 68 aa4.96□□□□□ -1.62
SMIM4-202ENST00000476842 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
SMIM4-202ENST00000476842 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
SMIM4-202ENST00000476842 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
SMIM4-202ENST00000476842 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
SMIM4-202ENST00000476842 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
SMIM4-202ENST00000476842 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
SMIM4-202ENST00000476842 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
SMIM4-202ENST00000476842 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
SMIM4-202ENST00000476842 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
SMIM4-202ENST00000476842 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
SMIM4-202ENST00000476842 H3BS24 57 aa4.29□□□□□ -1.72
SMIM4-202ENST00000476842 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
SMIM4-202ENST00000476842 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
SMIM4-202ENST00000476842 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
SMIM4-202ENST00000476842 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
SMIM4-202ENST00000476842 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
SMIM4-202ENST00000476842 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
SMIM4-202ENST00000476842 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
SMIM4-202ENST00000476842 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SMIM4-202ENST00000476842 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
SMIM4-202ENST00000476842 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
SMIM4-202ENST00000476842 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SMIM4-202ENST00000476842 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
SMIM4-202ENST00000476842 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
SMIM4-202ENST00000476842 PRM1P04553 51 aa3.2□□□□□ -1.9
SMIM4-202ENST00000476842 INE1O15225 51 aa3.18□□□□□ -1.9
SMIM4-202ENST00000476842 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SMIM4-202ENST00000476842 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SMIM4-202ENST00000476842 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
SMIM4-202ENST00000476842 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 76.5 ms