RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 APOBP04114 4563 aaKnown RBP1.69□□□□□ -2.14
CD55-208ENST00000476590 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
CD55-208ENST00000476590 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
CD55-208ENST00000476590 LCE3CQ5T5A8 94 aa1.66□□□□□ -2.14
CD55-208ENST00000476590 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
CD55-208ENST00000476590 SACSQ9NZJ4 4579 aa1.65□□□□□ -2.14
CD55-208ENST00000476590 LRP1Q07954 4544 aaKnown RBP1.63□□□□□ -2.15
CD55-208ENST00000476590 PKD1P98161 4303 aa1.62□□□□□ -2.15
CD55-208ENST00000476590 HMCN2Q8NDA2 5059 aa1.62□□□□□ -2.15
CD55-208ENST00000476590 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
CD55-208ENST00000476590 PLECQ15149 4684 aaKnown RBP1.6□□□□□ -2.15
CD55-208ENST00000476590 PKHD1P08F94 4074 aa1.6□□□□□ -2.15
CD55-208ENST00000476590 LRP1BQ9NZR2 4599 aa1.59□□□□□ -2.15
CD55-208ENST00000476590 STARD9Q9P2P6 4700 aa1.59□□□□□ -2.15
CD55-208ENST00000476590 PKHD1L1Q86WI1 4243 aa1.59□□□□□ -2.16
CD55-208ENST00000476590 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
CD55-208ENST00000476590 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
CD55-208ENST00000476590 VPS13BQ7Z7G8 4022 aa1.58□□□□□ -2.16
CD55-208ENST00000476590 FLGP20930 4061 aaPredicted RBP1.57□□□□□ -2.16
CD55-208ENST00000476590 DNAH5Q8TE73 4624 aa1.57□□□□□ -2.16
CD55-208ENST00000476590 TNXBP22105 4242 aa1.57□□□□□ -2.16
CD55-208ENST00000476590 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
CD55-208ENST00000476590 LCE3EQ5T5B0 92 aa1.55□□□□□ -2.16
CD55-208ENST00000476590 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
CD55-208ENST00000476590 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
CD55-208ENST00000476590 HSPG2P98160 4391 aa1.54□□□□□ -2.16
CD55-208ENST00000476590 KMT2DO14686 5537 aa1.53□□□□□ -2.16
CD55-208ENST00000476590 KRTAP10-4P60372 401 aaPredicted RBP1.52□□□□□ -2.17
CD55-208ENST00000476590 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
CD55-208ENST00000476590 SMR3BP02814 79 aaPredicted RBP1.52□□□□□ -2.17
CD55-208ENST00000476590 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
CD55-208ENST00000476590 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
CD55-208ENST00000476590 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
CD55-208ENST00000476590 M0R2T5 61 aa1.48□□□□□ -2.17
CD55-208ENST00000476590 FAT1Q14517 4588 aa1.46□□□□□ -2.18
CD55-208ENST00000476590 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
CD55-208ENST00000476590 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
CD55-208ENST00000476590 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
CD55-208ENST00000476590 LPAP08519 4548 aa1.42□□□□□ -2.18
CD55-208ENST00000476590 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
CD55-208ENST00000476590 SPRR2GQ9BYE4 73 aa1.4□□□□□ -2.19
CD55-208ENST00000476590 KRTAP19-2Q3LHN2 52 aa1.38□□□□□ -2.19
CD55-208ENST00000476590 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
CD55-208ENST00000476590 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
CD55-208ENST00000476590 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
CD55-208ENST00000476590 MT1HL1P0DM35 61 aa1.33□□□□□ -2.2
CD55-208ENST00000476590 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
CD55-208ENST00000476590 LRP2P98164 4655 aa1.32□□□□□ -2.2
CD55-208ENST00000476590 MT1XP80297 61 aa1.31□□□□□ -2.2
CD55-208ENST00000476590 PRM1P04553 51 aa1.3□□□□□ -2.2
CD55-208ENST00000476590 KRTAP19-8Q3LI54 63 aa1.28□□□□□ -2.2
CD55-208ENST00000476590 USH2AO75445 5202 aa1.24□□□□□ -2.21
CD55-208ENST00000476590 MT1BP07438 61 aa1.23□□□□□ -2.21
CD55-208ENST00000476590 MT1AP04731 61 aa1.2□□□□□ -2.22
CD55-208ENST00000476590 MT1EP04732 61 aa1.18□□□□□ -2.22
CD55-208ENST00000476590 MT1FP04733 61 aa1.17□□□□□ -2.22
CD55-208ENST00000476590 MT2AP02795 61 aa1.17□□□□□ -2.22
CD55-208ENST00000476590 MT1LQ93083 61 aa1.17□□□□□ -2.22
CD55-208ENST00000476590 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
CD55-208ENST00000476590 KRTAP19-7Q3SYF9 63 aa1.15□□□□□ -2.22
CD55-208ENST00000476590 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
CD55-208ENST00000476590 MT1GP13640 62 aa1.1□□□□□ -2.23
CD55-208ENST00000476590 SPRR2FQ96RM1 72 aa1.08□□□□□ -2.24
CD55-208ENST00000476590 MT1HP80294 61 aa1.08□□□□□ -2.24
CD55-208ENST00000476590 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
CD55-208ENST00000476590 SPRR2AP35326 72 aa1.04□□□□□ -2.24
CD55-208ENST00000476590 SPRR2DP22532 72 aa1.02□□□□□ -2.25
CD55-208ENST00000476590 SPRR2BP35325 72 aa1.02□□□□□ -2.25
CD55-208ENST00000476590 MT1MQ8N339 61 aa1.01□□□□□ -2.25
CD55-208ENST00000476590 SPRR2EP22531 72 aa1□□□□□ -2.25
CD55-208ENST00000476590 KRTAP19-6Q3LI70 58 aa0.98□□□□□ -2.25
CD55-208ENST00000476590 KRTAP6-1Q3LI64 71 aa0.98□□□□□ -2.25
CD55-208ENST00000476590 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
CD55-208ENST00000476590 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
CD55-208ENST00000476590 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
CD55-208ENST00000476590 MT4P47944 62 aa0.77□□□□□ -2.29
CD55-208ENST00000476590 KRTAP20-2Q3LI61 65 aa0.67□□□□□ -2.3
CD55-208ENST00000476590 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 705.3 ms