RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 POLR2KP53803 58 aaKnown RBP-0.04□□□□□ -2.42
VPS50-212ENST00000476413 DEFB124Q8NES8 71 aa-0.04□□□□□ -2.42
VPS50-212ENST00000476413 NEBP20929 6669 aa-0.04□□□□□ -2.42
VPS50-212ENST00000476413 NFAT5O94916 1531 aa-0.04□□□□□ -2.42
VPS50-212ENST00000476413 TOP2AP11388 1531 aaKnown RBP-0.04□□□□□ -2.42
VPS50-212ENST00000476413 CFAP47Q6ZTR5 3102 aa-0.04□□□□□ -2.42
VPS50-212ENST00000476413 USH2AO75445 5202 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 APOBP04114 4563 aaKnown RBP-0.05□□□□□ -2.42
VPS50-212ENST00000476413 EP400Q96L91 3159 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 DNAH17Q9UFH2 4485 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 IQGAP2Q13576 1575 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 CSMD1Q96PZ7 3565 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 K7EIM0 57 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 M0R1W7 72 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 TOMM5Q8N4H5 51 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 LEAP2Q969E1 77 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 KAAG1Q9UBP8 84 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 HILPDAQ9Y5L2 63 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 USP34Q70CQ2 3546 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 NRXN3Q9Y4C0 1643 aa-0.05□□□□□ -2.42
VPS50-212ENST00000476413 SPENQ96T58 3664 aaKnown RBP-0.06□□□□□ -2.42
VPS50-212ENST00000476413 DUOX1Q9NRD9 1551 aa-0.06□□□□□ -2.42
VPS50-212ENST00000476413 SMG1Q96Q15 3661 aaKnown RBP-0.06□□□□□ -2.42
VPS50-212ENST00000476413 SNRPGP62308 76 aaKnown RBP-0.06□□□□□ -2.42
VPS50-212ENST00000476413 KRTAP20-1Q3LI63 56 aa-0.06□□□□□ -2.42
VPS50-212ENST00000476413 WFDC10BQ8IUB3 73 aa-0.06□□□□□ -2.42
VPS50-212ENST00000476413 MROH2BQ7Z745 1585 aa-0.06□□□□□ -2.42
VPS50-212ENST00000476413 PCNTO95613 3336 aa-0.07□□□□□ -2.42
VPS50-212ENST00000476413 DNAH10Q8IVF4 4471 aa-0.07□□□□□ -2.42
VPS50-212ENST00000476413 WDFY4Q6ZS81 3184 aa-0.07□□□□□ -2.42
VPS50-212ENST00000476413 MYO15AQ9UKN7 3530 aa-0.07□□□□□ -2.42
VPS50-212ENST00000476413 DEFB4AO15263 64 aa-0.07□□□□□ -2.42
VPS50-212ENST00000476413 DEFB133Q30KQ1 61 aa-0.07□□□□□ -2.42
VPS50-212ENST00000476413 ABCA13Q86UQ4 5058 aa-0.07□□□□□ -2.42
VPS50-212ENST00000476413 DMDP11532 3685 aa-0.08□□□□□ -2.42
VPS50-212ENST00000476413 VPS13CQ709C8 3753 aa-0.08□□□□□ -2.42
VPS50-212ENST00000476413 ZFHX4Q86UP3 3567 aa-0.08□□□□□ -2.42
VPS50-212ENST00000476413 LINC01556Q5JQF7 62 aa-0.08□□□□□ -2.42
VPS50-212ENST00000476413 COX14Q96I36 57 aa-0.08□□□□□ -2.42
VPS50-212ENST00000476413 UNC80Q8N2C7 3258 aa-0.08□□□□□ -2.42
VPS50-212ENST00000476413 MKI67P46013 3256 aaKnown RBP-0.09□□□□□ -2.42
VPS50-212ENST00000476413 DCHS1Q96JQ0 3298 aa-0.09□□□□□ -2.42
VPS50-212ENST00000476413 LOC400499M0QZD8 3231 aa-0.09□□□□□ -2.42
VPS50-212ENST00000476413 PRCDQ00LT1 54 aa-0.09□□□□□ -2.42
VPS50-212ENST00000476413 TMEM167AQ8TBQ9 72 aa-0.09□□□□□ -2.42
VPS50-212ENST00000476413 TOMM7Q9P0U1 55 aa-0.09□□□□□ -2.42
VPS50-212ENST00000476413 SZT2Q5T011 3432 aa-0.09□□□□□ -2.42
VPS50-212ENST00000476413 XIRP2A4UGR9 3374 aa-0.09□□□□□ -2.42
VPS50-212ENST00000476413 MUC3AQ02505 3323 aa-0.1□□□□□ -2.42
VPS50-212ENST00000476413 GCC2Q8IWJ2 1684 aa-0.1□□□□□ -2.43
VPS50-212ENST00000476413 HTN1P15515 57 aa-0.1□□□□□ -2.43
VPS50-212ENST00000476413 KRTAP19-6Q3LI70 58 aa-0.1□□□□□ -2.43
VPS50-212ENST00000476413 ARHGAP5-AS1Q96IT6 56 aa-0.1□□□□□ -2.43
VPS50-212ENST00000476413 TTTY10Q9BZA0 68 aa-0.1□□□□□ -2.43
VPS50-212ENST00000476413 CENPFP49454 3210 aa-0.1□□□□□ -2.43
VPS50-212ENST00000476413 VCANP13611 3396 aa-0.11□□□□□ -2.43
VPS50-212ENST00000476413 VPS13AQ96RL7 3174 aa-0.11□□□□□ -2.43
VPS50-212ENST00000476413 RPL39P62891 51 aaKnown RBP-0.11□□□□□ -2.43
VPS50-212ENST00000476413 TFF3Q07654 80 aa-0.11□□□□□ -2.43
VPS50-212ENST00000476413 DEFB104AQ8WTQ1 72 aa-0.11□□□□□ -2.43
VPS50-212ENST00000476413 WDFY3Q8IZQ1 3526 aa-0.12□□□□□ -2.43
VPS50-212ENST00000476413 A0A096LPF7 62 aa-0.12□□□□□ -2.43
VPS50-212ENST00000476413 KRTAP19-2Q3LHN2 52 aa-0.12□□□□□ -2.43
VPS50-212ENST00000476413 RPL39LQ96EH5 51 aaKnown RBP-0.12□□□□□ -2.43
VPS50-212ENST00000476413 CDH23Q9H251 3354 aa-0.13□□□□□ -2.43
VPS50-212ENST00000476413 A0A096LNI7 61 aa-0.13□□□□□ -2.43
VPS50-212ENST00000476413 DNAH14Q0VDD8 3507 aa-0.13□□□□□ -2.43
VPS50-212ENST00000476413 GOLGB1Q14789 3259 aaKnown RBP-0.14□□□□□ -2.43
VPS50-212ENST00000476413 ASPMQ8IZT6 3477 aa-0.14□□□□□ -2.43
VPS50-212ENST00000476413 BRCA2P51587 3418 aa-0.15□□□□□ -2.43
VPS50-212ENST00000476413 RPL39P5Q59GN2 51 aa-0.16□□□□□ -2.44
VPS50-212ENST00000476413 UTRNP46939 3433 aa-0.18□□□□□ -2.44
VPS50-212ENST00000476413 DEFB108AA8MXU0 73 aa-0.18□□□□□ -2.44
VPS50-212ENST00000476413 DEFB108BQ8NET1 73 aa-0.18□□□□□ -2.44
VPS50-212ENST00000476413 APELAP0DMC3 54 aa-0.19□□□□□ -2.44
VPS50-212ENST00000476413 HTN3P15516 51 aa-0.2□□□□□ -2.44
VPS50-212ENST00000476413 H3BSH0 61 aa-0.21□□□□□ -2.44
VPS50-212ENST00000476413 STATHP02808 62 aa-0.23□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 67.6 ms