RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
TMEM254-211ENST00000476173 KMT2DO14686 5537 aa3.83□□□□□ -1.8
TMEM254-211ENST00000476173 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
TMEM254-211ENST00000476173 TNP1P09430 55 aa3.8□□□□□ -1.8
TMEM254-211ENST00000476173 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
TMEM254-211ENST00000476173 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
TMEM254-211ENST00000476173 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
TMEM254-211ENST00000476173 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
TMEM254-211ENST00000476173 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
TMEM254-211ENST00000476173 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
TMEM254-211ENST00000476173 ROMO1P60602 79 aa3.72□□□□□ -1.81
TMEM254-211ENST00000476173 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
TMEM254-211ENST00000476173 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
TMEM254-211ENST00000476173 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
TMEM254-211ENST00000476173 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
TMEM254-211ENST00000476173 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
TMEM254-211ENST00000476173 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
TMEM254-211ENST00000476173 MT1EP04732 61 aa3.61□□□□□ -1.83
TMEM254-211ENST00000476173 NEBP20929 6669 aa3.6□□□□□ -1.83
TMEM254-211ENST00000476173 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
TMEM254-211ENST00000476173 SPRR2EP22531 72 aa3.58□□□□□ -1.84
TMEM254-211ENST00000476173 SPRR2BP35325 72 aa3.58□□□□□ -1.84
TMEM254-211ENST00000476173 SPRR2AP35326 72 aa3.58□□□□□ -1.84
TMEM254-211ENST00000476173 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
TMEM254-211ENST00000476173 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
TMEM254-211ENST00000476173 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
TMEM254-211ENST00000476173 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
TMEM254-211ENST00000476173 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
TMEM254-211ENST00000476173 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
TMEM254-211ENST00000476173 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
TMEM254-211ENST00000476173 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
TMEM254-211ENST00000476173 MT1LQ93083 61 aa3.5□□□□□ -1.85
TMEM254-211ENST00000476173 MT1GP13640 62 aa3.47□□□□□ -1.85
TMEM254-211ENST00000476173 SPRR2DP22532 72 aa3.46□□□□□ -1.86
TMEM254-211ENST00000476173 MT1MQ8N339 61 aa3.42□□□□□ -1.86
TMEM254-211ENST00000476173 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
TMEM254-211ENST00000476173 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
TMEM254-211ENST00000476173 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
TMEM254-211ENST00000476173 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
TMEM254-211ENST00000476173 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
TMEM254-211ENST00000476173 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
TMEM254-211ENST00000476173 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
TMEM254-211ENST00000476173 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
TMEM254-211ENST00000476173 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
TMEM254-211ENST00000476173 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
TMEM254-211ENST00000476173 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
TMEM254-211ENST00000476173 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
TMEM254-211ENST00000476173 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
TMEM254-211ENST00000476173 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
TMEM254-211ENST00000476173 MT4P47944 62 aa3□□□□□ -1.93
TMEM254-211ENST00000476173 MT1AP04731 61 aa2.98□□□□□ -1.93
TMEM254-211ENST00000476173 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
TMEM254-211ENST00000476173 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
TMEM254-211ENST00000476173 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
TMEM254-211ENST00000476173 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.94
TMEM254-211ENST00000476173 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
TMEM254-211ENST00000476173 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
TMEM254-211ENST00000476173 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
TMEM254-211ENST00000476173 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
TMEM254-211ENST00000476173 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
TMEM254-211ENST00000476173 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
TMEM254-211ENST00000476173 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
TMEM254-211ENST00000476173 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
TMEM254-211ENST00000476173 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
TMEM254-211ENST00000476173 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
TMEM254-211ENST00000476173 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
TMEM254-211ENST00000476173 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
TMEM254-211ENST00000476173 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
TMEM254-211ENST00000476173 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
TMEM254-211ENST00000476173 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
TMEM254-211ENST00000476173 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
TMEM254-211ENST00000476173 INE1O15225 51 aa2.08□□□□□ -2.08
TMEM254-211ENST00000476173 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
TMEM254-211ENST00000476173 PRM1P04553 51 aa1.93□□□□□ -2.1
TMEM254-211ENST00000476173 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TMEM254-211ENST00000476173 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
TMEM254-211ENST00000476173 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
TMEM254-211ENST00000476173 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 48.8 ms