RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
SOD1-204ENST00000476106 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
SOD1-204ENST00000476106 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
SOD1-204ENST00000476106 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
SOD1-204ENST00000476106 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
SOD1-204ENST00000476106 MT1EP04732 61 aa5.08□□□□□ -1.6
SOD1-204ENST00000476106 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
SOD1-204ENST00000476106 CDC42SE1Q9NRR8 79 aa5.07□□□□□ -1.6
SOD1-204ENST00000476106 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
SOD1-204ENST00000476106 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
SOD1-204ENST00000476106 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
SOD1-204ENST00000476106 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
SOD1-204ENST00000476106 ROMO1P60602 79 aa4.93□□□□□ -1.62
SOD1-204ENST00000476106 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
SOD1-204ENST00000476106 MT4P47944 62 aa4.91□□□□□ -1.62
SOD1-204ENST00000476106 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
SOD1-204ENST00000476106 MT1LQ93083 61 aa4.9□□□□□ -1.63
SOD1-204ENST00000476106 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
SOD1-204ENST00000476106 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
SOD1-204ENST00000476106 MT1GP13640 62 aa4.85□□□□□ -1.63
SOD1-204ENST00000476106 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
SOD1-204ENST00000476106 MT1MQ8N339 61 aa4.83□□□□□ -1.64
SOD1-204ENST00000476106 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
SOD1-204ENST00000476106 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
SOD1-204ENST00000476106 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
SOD1-204ENST00000476106 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
SOD1-204ENST00000476106 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
SOD1-204ENST00000476106 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
SOD1-204ENST00000476106 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
SOD1-204ENST00000476106 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
SOD1-204ENST00000476106 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
SOD1-204ENST00000476106 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
SOD1-204ENST00000476106 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
SOD1-204ENST00000476106 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
SOD1-204ENST00000476106 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
SOD1-204ENST00000476106 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
SOD1-204ENST00000476106 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
SOD1-204ENST00000476106 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
SOD1-204ENST00000476106 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
SOD1-204ENST00000476106 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
SOD1-204ENST00000476106 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
SOD1-204ENST00000476106 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
SOD1-204ENST00000476106 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SOD1-204ENST00000476106 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
SOD1-204ENST00000476106 MT1AP04731 61 aa4.17□□□□□ -1.74
SOD1-204ENST00000476106 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
SOD1-204ENST00000476106 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
SOD1-204ENST00000476106 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
SOD1-204ENST00000476106 H3BS24 57 aa4.15□□□□□ -1.75
SOD1-204ENST00000476106 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
SOD1-204ENST00000476106 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
SOD1-204ENST00000476106 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
SOD1-204ENST00000476106 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SOD1-204ENST00000476106 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
SOD1-204ENST00000476106 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SOD1-204ENST00000476106 MT3P25713 68 aa3.78□□□□□ -1.8
SOD1-204ENST00000476106 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
SOD1-204ENST00000476106 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
SOD1-204ENST00000476106 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
SOD1-204ENST00000476106 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
SOD1-204ENST00000476106 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
SOD1-204ENST00000476106 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
SOD1-204ENST00000476106 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
SOD1-204ENST00000476106 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
SOD1-204ENST00000476106 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
SOD1-204ENST00000476106 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
SOD1-204ENST00000476106 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
SOD1-204ENST00000476106 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
SOD1-204ENST00000476106 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SOD1-204ENST00000476106 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
SOD1-204ENST00000476106 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
SOD1-204ENST00000476106 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SOD1-204ENST00000476106 PRM1P04553 51 aa2.57□□□□□ -2
SOD1-204ENST00000476106 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
SOD1-204ENST00000476106 INE1O15225 51 aa2.51□□□□□ -2.01
SOD1-204ENST00000476106 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
SOD1-204ENST00000476106 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SOD1-204ENST00000476106 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 158.6 ms