RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
UBR4-212ENST00000475973 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.94
UBR4-212ENST00000475973 KRTAP19-6Q3LI70 58 aa2.9□□□□□ -1.95
UBR4-212ENST00000475973 TNP1P09430 55 aa2.89□□□□□ -1.95
UBR4-212ENST00000475973 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
UBR4-212ENST00000475973 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
UBR4-212ENST00000475973 KRTAP19-8Q3LI54 63 aa2.84□□□□□ -1.95
UBR4-212ENST00000475973 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.96
UBR4-212ENST00000475973 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
UBR4-212ENST00000475973 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
UBR4-212ENST00000475973 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
UBR4-212ENST00000475973 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
UBR4-212ENST00000475973 MT1BP07438 61 aa2.75□□□□□ -1.97
UBR4-212ENST00000475973 INE1O15225 51 aa2.74□□□□□ -1.97
UBR4-212ENST00000475973 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
UBR4-212ENST00000475973 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
UBR4-212ENST00000475973 MT1XP80297 61 aa2.72□□□□□ -1.97
UBR4-212ENST00000475973 NEBP20929 6669 aa2.69□□□□□ -1.98
UBR4-212ENST00000475973 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
UBR4-212ENST00000475973 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
UBR4-212ENST00000475973 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
UBR4-212ENST00000475973 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
UBR4-212ENST00000475973 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
UBR4-212ENST00000475973 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
UBR4-212ENST00000475973 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
UBR4-212ENST00000475973 MDN1Q9NU22 5596 aa2.57□□□□□ -2
UBR4-212ENST00000475973 KMT2DO14686 5537 aa2.57□□□□□ -2
UBR4-212ENST00000475973 SPRR2EP22531 72 aa2.55□□□□□ -2
UBR4-212ENST00000475973 SPRR2BP35325 72 aa2.55□□□□□ -2
UBR4-212ENST00000475973 SPRR2AP35326 72 aa2.55□□□□□ -2
UBR4-212ENST00000475973 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
UBR4-212ENST00000475973 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
UBR4-212ENST00000475973 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
UBR4-212ENST00000475973 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
UBR4-212ENST00000475973 SPRR2DP22532 72 aa2.47□□□□□ -2.01
UBR4-212ENST00000475973 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
UBR4-212ENST00000475973 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
UBR4-212ENST00000475973 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.02
UBR4-212ENST00000475973 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
UBR4-212ENST00000475973 MT1EP04732 61 aa2.36□□□□□ -2.03
UBR4-212ENST00000475973 MT1LQ93083 61 aa2.36□□□□□ -2.03
UBR4-212ENST00000475973 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
UBR4-212ENST00000475973 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
UBR4-212ENST00000475973 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
UBR4-212ENST00000475973 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
UBR4-212ENST00000475973 MT1GP13640 62 aa2.23□□□□□ -2.05
UBR4-212ENST00000475973 MT1MQ8N339 61 aa2.18□□□□□ -2.06
UBR4-212ENST00000475973 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
UBR4-212ENST00000475973 MT4P47944 62 aa2.15□□□□□ -2.07
UBR4-212ENST00000475973 KRTAP4-3Q9BYR4 195 aa2.13□□□□□ -2.07
UBR4-212ENST00000475973 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
UBR4-212ENST00000475973 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
UBR4-212ENST00000475973 MT1AP04731 61 aa2.08□□□□□ -2.08
UBR4-212ENST00000475973 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
UBR4-212ENST00000475973 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
UBR4-212ENST00000475973 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
UBR4-212ENST00000475973 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
UBR4-212ENST00000475973 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
UBR4-212ENST00000475973 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
UBR4-212ENST00000475973 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
UBR4-212ENST00000475973 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
UBR4-212ENST00000475973 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
UBR4-212ENST00000475973 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
UBR4-212ENST00000475973 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
UBR4-212ENST00000475973 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
UBR4-212ENST00000475973 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
UBR4-212ENST00000475973 PRM1P04553 51 aa1.79□□□□□ -2.12
UBR4-212ENST00000475973 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
UBR4-212ENST00000475973 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
UBR4-212ENST00000475973 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
UBR4-212ENST00000475973 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
UBR4-212ENST00000475973 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
UBR4-212ENST00000475973 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
UBR4-212ENST00000475973 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
UBR4-212ENST00000475973 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
UBR4-212ENST00000475973 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
UBR4-212ENST00000475973 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
UBR4-212ENST00000475973 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms