RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
NUDCD3-206ENST00000475952 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
NUDCD3-206ENST00000475952 V9GYY9 64 aa4.18□□□□□ -1.74
NUDCD3-206ENST00000475952 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
NUDCD3-206ENST00000475952 TNP1P09430 55 aa4.15□□□□□ -1.75
NUDCD3-206ENST00000475952 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
NUDCD3-206ENST00000475952 Q1T7F1 81 aa4.14□□□□□ -1.75
NUDCD3-206ENST00000475952 MT4P47944 62 aa4.12□□□□□ -1.75
NUDCD3-206ENST00000475952 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
NUDCD3-206ENST00000475952 MT1GP13640 62 aa4.11□□□□□ -1.75
NUDCD3-206ENST00000475952 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
NUDCD3-206ENST00000475952 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
NUDCD3-206ENST00000475952 UQCR11O14957 56 aa4.08□□□□□ -1.76
NUDCD3-206ENST00000475952 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
NUDCD3-206ENST00000475952 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
NUDCD3-206ENST00000475952 MT1LQ93083 61 aa4.05□□□□□ -1.76
NUDCD3-206ENST00000475952 MT1MQ8N339 61 aa4.04□□□□□ -1.76
NUDCD3-206ENST00000475952 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
NUDCD3-206ENST00000475952 PSPHP1O15172 72 aa4.02□□□□□ -1.77
NUDCD3-206ENST00000475952 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
NUDCD3-206ENST00000475952 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
NUDCD3-206ENST00000475952 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
NUDCD3-206ENST00000475952 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
NUDCD3-206ENST00000475952 K7ERS5 55 aa3.95□□□□□ -1.78
NUDCD3-206ENST00000475952 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
NUDCD3-206ENST00000475952 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
NUDCD3-206ENST00000475952 A6NED7 52 aa3.93□□□□□ -1.78
NUDCD3-206ENST00000475952 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
NUDCD3-206ENST00000475952 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
NUDCD3-206ENST00000475952 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
NUDCD3-206ENST00000475952 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
NUDCD3-206ENST00000475952 CDC42SE1Q9NRR8 79 aa3.87□□□□□ -1.79
NUDCD3-206ENST00000475952 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
NUDCD3-206ENST00000475952 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
NUDCD3-206ENST00000475952 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
NUDCD3-206ENST00000475952 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
NUDCD3-206ENST00000475952 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
NUDCD3-206ENST00000475952 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
NUDCD3-206ENST00000475952 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
NUDCD3-206ENST00000475952 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
NUDCD3-206ENST00000475952 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
NUDCD3-206ENST00000475952 ROMO1P60602 79 aa3.64□□□□□ -1.83
NUDCD3-206ENST00000475952 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
NUDCD3-206ENST00000475952 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
NUDCD3-206ENST00000475952 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
NUDCD3-206ENST00000475952 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
NUDCD3-206ENST00000475952 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
NUDCD3-206ENST00000475952 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
NUDCD3-206ENST00000475952 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
NUDCD3-206ENST00000475952 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
NUDCD3-206ENST00000475952 MT1AP04731 61 aa3.46□□□□□ -1.86
NUDCD3-206ENST00000475952 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
NUDCD3-206ENST00000475952 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
NUDCD3-206ENST00000475952 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
NUDCD3-206ENST00000475952 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
NUDCD3-206ENST00000475952 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
NUDCD3-206ENST00000475952 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
NUDCD3-206ENST00000475952 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
NUDCD3-206ENST00000475952 MT3P25713 68 aa3.17□□□□□ -1.9
NUDCD3-206ENST00000475952 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
NUDCD3-206ENST00000475952 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
NUDCD3-206ENST00000475952 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
NUDCD3-206ENST00000475952 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
NUDCD3-206ENST00000475952 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
NUDCD3-206ENST00000475952 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
NUDCD3-206ENST00000475952 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
NUDCD3-206ENST00000475952 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
NUDCD3-206ENST00000475952 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
NUDCD3-206ENST00000475952 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
NUDCD3-206ENST00000475952 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
NUDCD3-206ENST00000475952 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
NUDCD3-206ENST00000475952 INE1O15225 51 aa2.27□□□□□ -2.05
NUDCD3-206ENST00000475952 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
NUDCD3-206ENST00000475952 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
NUDCD3-206ENST00000475952 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
NUDCD3-206ENST00000475952 PRM1P04553 51 aa1.86□□□□□ -2.11
NUDCD3-206ENST00000475952 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
NUDCD3-206ENST00000475952 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 108.8 ms