RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
ABCF3-211ENST00000475728 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
ABCF3-211ENST00000475728 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
ABCF3-211ENST00000475728 A6NED7 52 aa5.28□□□□□ -1.56
ABCF3-211ENST00000475728 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
ABCF3-211ENST00000475728 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
ABCF3-211ENST00000475728 MT1GP13640 62 aa5.21□□□□□ -1.58
ABCF3-211ENST00000475728 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
ABCF3-211ENST00000475728 MT1LQ93083 61 aa5.15□□□□□ -1.59
ABCF3-211ENST00000475728 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
ABCF3-211ENST00000475728 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
ABCF3-211ENST00000475728 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
ABCF3-211ENST00000475728 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
ABCF3-211ENST00000475728 CDC42SE1Q9NRR8 79 aa5.09□□□□□ -1.59
ABCF3-211ENST00000475728 MT1MQ8N339 61 aa5.08□□□□□ -1.6
ABCF3-211ENST00000475728 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
ABCF3-211ENST00000475728 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
ABCF3-211ENST00000475728 ROMO1P60602 79 aa5□□□□□ -1.61
ABCF3-211ENST00000475728 MT4P47944 62 aa4.99□□□□□ -1.61
ABCF3-211ENST00000475728 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
ABCF3-211ENST00000475728 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
ABCF3-211ENST00000475728 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
ABCF3-211ENST00000475728 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
ABCF3-211ENST00000475728 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
ABCF3-211ENST00000475728 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
ABCF3-211ENST00000475728 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
ABCF3-211ENST00000475728 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
ABCF3-211ENST00000475728 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
ABCF3-211ENST00000475728 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
ABCF3-211ENST00000475728 KRTAP5-4Q6L8H1 288 aa4.75□□□□□ -1.65
ABCF3-211ENST00000475728 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
ABCF3-211ENST00000475728 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
ABCF3-211ENST00000475728 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
ABCF3-211ENST00000475728 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
ABCF3-211ENST00000475728 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
ABCF3-211ENST00000475728 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
ABCF3-211ENST00000475728 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
ABCF3-211ENST00000475728 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
ABCF3-211ENST00000475728 MT1AP04731 61 aa4.4□□□□□ -1.71
ABCF3-211ENST00000475728 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
ABCF3-211ENST00000475728 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
ABCF3-211ENST00000475728 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
ABCF3-211ENST00000475728 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
ABCF3-211ENST00000475728 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
ABCF3-211ENST00000475728 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
ABCF3-211ENST00000475728 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
ABCF3-211ENST00000475728 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
ABCF3-211ENST00000475728 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
ABCF3-211ENST00000475728 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
ABCF3-211ENST00000475728 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
ABCF3-211ENST00000475728 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
ABCF3-211ENST00000475728 MT3P25713 68 aa4.04□□□□□ -1.76
ABCF3-211ENST00000475728 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
ABCF3-211ENST00000475728 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
ABCF3-211ENST00000475728 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
ABCF3-211ENST00000475728 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
ABCF3-211ENST00000475728 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
ABCF3-211ENST00000475728 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
ABCF3-211ENST00000475728 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
ABCF3-211ENST00000475728 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
ABCF3-211ENST00000475728 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
ABCF3-211ENST00000475728 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
ABCF3-211ENST00000475728 H3BS24 57 aa3.36□□□□□ -1.87
ABCF3-211ENST00000475728 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
ABCF3-211ENST00000475728 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
ABCF3-211ENST00000475728 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
ABCF3-211ENST00000475728 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
ABCF3-211ENST00000475728 PHGR1C9JFL3 82 aa3□□□□□ -1.93
ABCF3-211ENST00000475728 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
ABCF3-211ENST00000475728 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
ABCF3-211ENST00000475728 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
ABCF3-211ENST00000475728 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
ABCF3-211ENST00000475728 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
ABCF3-211ENST00000475728 PRM1P04553 51 aa2.53□□□□□ -2
ABCF3-211ENST00000475728 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
ABCF3-211ENST00000475728 INE1O15225 51 aa2.48□□□□□ -2.01
ABCF3-211ENST00000475728 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
ABCF3-211ENST00000475728 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms