RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SERP1Q9Y6X1 66 aa3.71□□□□□ -1.82
PDPN-204ENST00000475043 SPRR2DP22532 72 aa3.7□□□□□ -1.82
PDPN-204ENST00000475043 COX7CP15954 63 aa3.68□□□□□ -1.82
PDPN-204ENST00000475043 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
PDPN-204ENST00000475043 A0A0D9SG42 100 aa3.66□□□□□ -1.82
PDPN-204ENST00000475043 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
PDPN-204ENST00000475043 H7BZZ5 65 aa3.63□□□□□ -1.83
PDPN-204ENST00000475043 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
PDPN-204ENST00000475043 A0A1B0GU33 70 aa3.62□□□□□ -1.83
PDPN-204ENST00000475043 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
PDPN-204ENST00000475043 SPINT4Q6UDR6 99 aa3.61□□□□□ -1.83
PDPN-204ENST00000475043 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
PDPN-204ENST00000475043 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
PDPN-204ENST00000475043 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
PDPN-204ENST00000475043 A0A1B0GU69 56 aa3.56□□□□□ -1.84
PDPN-204ENST00000475043 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
PDPN-204ENST00000475043 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
PDPN-204ENST00000475043 K7ERS5 55 aa3.53□□□□□ -1.84
PDPN-204ENST00000475043 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
PDPN-204ENST00000475043 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
PDPN-204ENST00000475043 ATP5EP56381 51 aaPredicted RBP3.52□□□□□ -1.85
PDPN-204ENST00000475043 A6NED7 52 aa3.51□□□□□ -1.85
PDPN-204ENST00000475043 MT1EP04732 61 aa3.5□□□□□ -1.85
PDPN-204ENST00000475043 A8MU10 97 aa3.49□□□□□ -1.85
PDPN-204ENST00000475043 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
PDPN-204ENST00000475043 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
PDPN-204ENST00000475043 Q1T7F1 81 aa3.44□□□□□ -1.86
PDPN-204ENST00000475043 PRR15LQ9BU68 103 aa3.44□□□□□ -1.86
PDPN-204ENST00000475043 ROMO1P60602 79 aa3.41□□□□□ -1.86
PDPN-204ENST00000475043 TNP1P09430 55 aa3.4□□□□□ -1.87
PDPN-204ENST00000475043 MT1GP13640 62 aa3.4□□□□□ -1.87
PDPN-204ENST00000475043 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
PDPN-204ENST00000475043 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
PDPN-204ENST00000475043 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
PDPN-204ENST00000475043 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
PDPN-204ENST00000475043 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
PDPN-204ENST00000475043 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
PDPN-204ENST00000475043 MT1MQ8N339 61 aa3.34□□□□□ -1.87
PDPN-204ENST00000475043 MT1LQ93083 61 aa3.34□□□□□ -1.87
PDPN-204ENST00000475043 UQCR11O14957 56 aa3.32□□□□□ -1.88
PDPN-204ENST00000475043 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
PDPN-204ENST00000475043 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
PDPN-204ENST00000475043 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
PDPN-204ENST00000475043 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
PDPN-204ENST00000475043 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
PDPN-204ENST00000475043 MT4P47944 62 aa3.25□□□□□ -1.89
PDPN-204ENST00000475043 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
PDPN-204ENST00000475043 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
PDPN-204ENST00000475043 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
PDPN-204ENST00000475043 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
PDPN-204ENST00000475043 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
PDPN-204ENST00000475043 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
PDPN-204ENST00000475043 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
PDPN-204ENST00000475043 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
PDPN-204ENST00000475043 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
PDPN-204ENST00000475043 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
PDPN-204ENST00000475043 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
PDPN-204ENST00000475043 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
PDPN-204ENST00000475043 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
PDPN-204ENST00000475043 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
PDPN-204ENST00000475043 MT1AP04731 61 aa2.84□□□□□ -1.95
PDPN-204ENST00000475043 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
PDPN-204ENST00000475043 INE1O15225 51 aa2.74□□□□□ -1.97
PDPN-204ENST00000475043 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
PDPN-204ENST00000475043 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
PDPN-204ENST00000475043 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
PDPN-204ENST00000475043 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
PDPN-204ENST00000475043 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
PDPN-204ENST00000475043 MUC5ACP98088 5654 aa2.53□□□□□ -2
PDPN-204ENST00000475043 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
PDPN-204ENST00000475043 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
PDPN-204ENST00000475043 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
PDPN-204ENST00000475043 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
PDPN-204ENST00000475043 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
PDPN-204ENST00000475043 PRM1P04553 51 aa1.52□□□□□ -2.17
PDPN-204ENST00000475043 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
PDPN-204ENST00000475043 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 30.1 ms