RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
CCDC93-208ENST00000474546 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
CCDC93-208ENST00000474546 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
CCDC93-208ENST00000474546 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
CCDC93-208ENST00000474546 SPRR2EP22531 72 aa3.21□□□□□ -1.9
CCDC93-208ENST00000474546 SPRR2BP35325 72 aa3.21□□□□□ -1.9
CCDC93-208ENST00000474546 SPRR2AP35326 72 aa3.21□□□□□ -1.9
CCDC93-208ENST00000474546 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
CCDC93-208ENST00000474546 KRTAP4-8Q9BYQ9 185 aa3.21□□□□□ -1.9
CCDC93-208ENST00000474546 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
CCDC93-208ENST00000474546 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
CCDC93-208ENST00000474546 MT2AP02795 61 aa3.17□□□□□ -1.9
CCDC93-208ENST00000474546 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
CCDC93-208ENST00000474546 KRTAP10-10P60014 251 aa3.16□□□□□ -1.9
CCDC93-208ENST00000474546 MT1FP04733 61 aa3.13□□□□□ -1.91
CCDC93-208ENST00000474546 SPRR2DP22532 72 aa3.12□□□□□ -1.91
CCDC93-208ENST00000474546 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
CCDC93-208ENST00000474546 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
CCDC93-208ENST00000474546 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.91
CCDC93-208ENST00000474546 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
CCDC93-208ENST00000474546 MT1XP80297 61 aa3.06□□□□□ -1.92
CCDC93-208ENST00000474546 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
CCDC93-208ENST00000474546 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
CCDC93-208ENST00000474546 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CCDC93-208ENST00000474546 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
CCDC93-208ENST00000474546 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
CCDC93-208ENST00000474546 MT1BP07438 61 aa3.02□□□□□ -1.93
CCDC93-208ENST00000474546 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
CCDC93-208ENST00000474546 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
CCDC93-208ENST00000474546 KRTAP4-8A0A0G2JLE6 195 aa2.98□□□□□ -1.93
CCDC93-208ENST00000474546 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
CCDC93-208ENST00000474546 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-208ENST00000474546 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
CCDC93-208ENST00000474546 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
CCDC93-208ENST00000474546 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
CCDC93-208ENST00000474546 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
CCDC93-208ENST00000474546 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
CCDC93-208ENST00000474546 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
CCDC93-208ENST00000474546 MT4P47944 62 aa2.77□□□□□ -1.97
CCDC93-208ENST00000474546 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
CCDC93-208ENST00000474546 MT1EP04732 61 aa2.72□□□□□ -1.97
CCDC93-208ENST00000474546 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
CCDC93-208ENST00000474546 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
CCDC93-208ENST00000474546 MT1LQ93083 61 aa2.7□□□□□ -1.98
CCDC93-208ENST00000474546 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
CCDC93-208ENST00000474546 MT1GP13640 62 aa2.58□□□□□ -2
CCDC93-208ENST00000474546 KRTAP12-4P60329 112 aa2.54□□□□□ -2
CCDC93-208ENST00000474546 MT1AP04731 61 aa2.53□□□□□ -2
CCDC93-208ENST00000474546 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
CCDC93-208ENST00000474546 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
CCDC93-208ENST00000474546 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
CCDC93-208ENST00000474546 MT1MQ8N339 61 aa2.48□□□□□ -2.01
CCDC93-208ENST00000474546 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
CCDC93-208ENST00000474546 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CCDC93-208ENST00000474546 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
CCDC93-208ENST00000474546 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CCDC93-208ENST00000474546 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
CCDC93-208ENST00000474546 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
CCDC93-208ENST00000474546 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
CCDC93-208ENST00000474546 PRM1P04553 51 aa2.23□□□□□ -2.05
CCDC93-208ENST00000474546 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
CCDC93-208ENST00000474546 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
CCDC93-208ENST00000474546 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
CCDC93-208ENST00000474546 MT3P25713 68 aa2.14□□□□□ -2.07
CCDC93-208ENST00000474546 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
CCDC93-208ENST00000474546 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
CCDC93-208ENST00000474546 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
CCDC93-208ENST00000474546 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CCDC93-208ENST00000474546 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
CCDC93-208ENST00000474546 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
CCDC93-208ENST00000474546 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
CCDC93-208ENST00000474546 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
CCDC93-208ENST00000474546 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
CCDC93-208ENST00000474546 KRTAP4-4Q9BYR3 166 aa1.6□□□□□ -2.15
CCDC93-208ENST00000474546 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
CCDC93-208ENST00000474546 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
CCDC93-208ENST00000474546 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
CCDC93-208ENST00000474546 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 40 ms