RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MT1EP04732 61 aa6.9□□□□□ -1.3
CCDC171-206ENST00000474193 ROMO1P60602 79 aa6.88□□□□□ -1.31
CCDC171-206ENST00000474193 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
CCDC171-206ENST00000474193 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
CCDC171-206ENST00000474193 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
CCDC171-206ENST00000474193 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
CCDC171-206ENST00000474193 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
CCDC171-206ENST00000474193 MT1GP13640 62 aa6.76□□□□□ -1.33
CCDC171-206ENST00000474193 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
CCDC171-206ENST00000474193 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
CCDC171-206ENST00000474193 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
CCDC171-206ENST00000474193 MT1LQ93083 61 aa6.6□□□□□ -1.35
CCDC171-206ENST00000474193 MT1MQ8N339 61 aa6.57□□□□□ -1.36
CCDC171-206ENST00000474193 PMAIP1Q13794 54 aa6.54□□□□□ -1.36
CCDC171-206ENST00000474193 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
CCDC171-206ENST00000474193 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
CCDC171-206ENST00000474193 PRO0628Q9UI54 55 aa6.44□□□□□ -1.38
CCDC171-206ENST00000474193 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
CCDC171-206ENST00000474193 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
CCDC171-206ENST00000474193 KRTAP4-3Q9BYR4 195 aa6.37□□□□□ -1.39
CCDC171-206ENST00000474193 MT4P47944 62 aa6.34□□□□□ -1.39
CCDC171-206ENST00000474193 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
CCDC171-206ENST00000474193 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
CCDC171-206ENST00000474193 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
CCDC171-206ENST00000474193 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
CCDC171-206ENST00000474193 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
CCDC171-206ENST00000474193 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
CCDC171-206ENST00000474193 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
CCDC171-206ENST00000474193 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
CCDC171-206ENST00000474193 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
CCDC171-206ENST00000474193 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
CCDC171-206ENST00000474193 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
CCDC171-206ENST00000474193 KRTAP5-5Q701N2 237 aaPredicted RBP5.97□□□□□ -1.45
CCDC171-206ENST00000474193 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
CCDC171-206ENST00000474193 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
CCDC171-206ENST00000474193 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
CCDC171-206ENST00000474193 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
CCDC171-206ENST00000474193 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
CCDC171-206ENST00000474193 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
CCDC171-206ENST00000474193 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
CCDC171-206ENST00000474193 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
CCDC171-206ENST00000474193 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
CCDC171-206ENST00000474193 MT1AP04731 61 aa5.64□□□□□ -1.51
CCDC171-206ENST00000474193 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
CCDC171-206ENST00000474193 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
CCDC171-206ENST00000474193 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
CCDC171-206ENST00000474193 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
CCDC171-206ENST00000474193 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
CCDC171-206ENST00000474193 MT3P25713 68 aa5.22□□□□□ -1.57
CCDC171-206ENST00000474193 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
CCDC171-206ENST00000474193 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
CCDC171-206ENST00000474193 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
CCDC171-206ENST00000474193 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
CCDC171-206ENST00000474193 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
CCDC171-206ENST00000474193 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
CCDC171-206ENST00000474193 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
CCDC171-206ENST00000474193 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
CCDC171-206ENST00000474193 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
CCDC171-206ENST00000474193 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CCDC171-206ENST00000474193 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
CCDC171-206ENST00000474193 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
CCDC171-206ENST00000474193 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
CCDC171-206ENST00000474193 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
CCDC171-206ENST00000474193 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
CCDC171-206ENST00000474193 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
CCDC171-206ENST00000474193 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
CCDC171-206ENST00000474193 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
CCDC171-206ENST00000474193 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
CCDC171-206ENST00000474193 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
CCDC171-206ENST00000474193 INE1O15225 51 aa3.8□□□□□ -1.8
CCDC171-206ENST00000474193 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
CCDC171-206ENST00000474193 H3BS24 57 aa3.62□□□□□ -1.83
CCDC171-206ENST00000474193 PRM1P04553 51 aa3.53□□□□□ -1.84
CCDC171-206ENST00000474193 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
CCDC171-206ENST00000474193 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CCDC171-206ENST00000474193 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
CCDC171-206ENST00000474193 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
CCDC171-206ENST00000474193 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 48.9 ms