RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C10orf95Q9H7T3 257 aa7.8□□□□□ -1.16
APP-215ENST00000474136 ROMO1P60602 79 aa7.76□□□□□ -1.17
APP-215ENST00000474136 TNP1P09430 55 aa7.75□□□□□ -1.17
APP-215ENST00000474136 PMAIP1Q13794 54 aa7.71□□□□□ -1.18
APP-215ENST00000474136 LCE1DQ5T752 114 aa7.71□□□□□ -1.18
APP-215ENST00000474136 LCE5AQ5TCM9 118 aa7.7□□□□□ -1.18
APP-215ENST00000474136 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
APP-215ENST00000474136 HMCN1Q96RW7 5635 aa7.63□□□□□ -1.19
APP-215ENST00000474136 AHNAK2Q8IVF2 5795 aa7.62□□□□□ -1.19
APP-215ENST00000474136 KRTAP19-3Q7Z4W3 81 aa7.58□□□□□ -1.2
APP-215ENST00000474136 KRTAP19-7Q3SYF9 63 aa7.57□□□□□ -1.2
APP-215ENST00000474136 MT4P47944 62 aa7.55□□□□□ -1.2
APP-215ENST00000474136 MT1EP04732 61 aa7.53□□□□□ -1.2
APP-215ENST00000474136 SVIPQ8NHG7 77 aa7.49□□□□□ -1.21
APP-215ENST00000474136 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
APP-215ENST00000474136 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
APP-215ENST00000474136 KRTAP5-10Q6L8G5 202 aa7.48□□□□□ -1.21
APP-215ENST00000474136 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
APP-215ENST00000474136 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
APP-215ENST00000474136 MT1GP13640 62 aa7.31□□□□□ -1.24
APP-215ENST00000474136 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
APP-215ENST00000474136 KTN1-AS1Q86SY8 53 aa7.27□□□□□ -1.24
APP-215ENST00000474136 KRTAP5-7Q6L8G8 165 aa7.26□□□□□ -1.25
APP-215ENST00000474136 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
APP-215ENST00000474136 KRTAP19-5Q3LI72 72 aa7.23□□□□□ -1.25
APP-215ENST00000474136 MT1MQ8N339 61 aa7.22□□□□□ -1.25
APP-215ENST00000474136 KRTAP5-3Q6L8H2 238 aa7.16□□□□□ -1.26
APP-215ENST00000474136 KRTAP4-3Q9BYR4 195 aa7.15□□□□□ -1.26
APP-215ENST00000474136 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
APP-215ENST00000474136 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
APP-215ENST00000474136 MT1LQ93083 61 aa7.09□□□□□ -1.27
APP-215ENST00000474136 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
APP-215ENST00000474136 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
APP-215ENST00000474136 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
APP-215ENST00000474136 KRTAP20-2Q3LI61 65 aa6.9□□□□□ -1.3
APP-215ENST00000474136 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
APP-215ENST00000474136 KRTAP5-5Q701N2 237 aaPredicted RBP6.68□□□□□ -1.34
APP-215ENST00000474136 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
APP-215ENST00000474136 KRTAP12-4P60329 112 aa6.63□□□□□ -1.35
APP-215ENST00000474136 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
APP-215ENST00000474136 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
APP-215ENST00000474136 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
APP-215ENST00000474136 AHNAKQ09666 5890 aaKnown RBP6.42□□□□□ -1.38
APP-215ENST00000474136 MUC5ACP98088 5654 aa6.36□□□□□ -1.39
APP-215ENST00000474136 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
APP-215ENST00000474136 KRTAP5-8O75690 187 aa6.27□□□□□ -1.41
APP-215ENST00000474136 KRTAP5-2Q701N4 177 aa6.24□□□□□ -1.41
APP-215ENST00000474136 H3BS24 57 aa6.22□□□□□ -1.41
APP-215ENST00000474136 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.43
APP-215ENST00000474136 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
APP-215ENST00000474136 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
APP-215ENST00000474136 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
APP-215ENST00000474136 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
APP-215ENST00000474136 MT1AP04731 61 aa6□□□□□ -1.45
APP-215ENST00000474136 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.47
APP-215ENST00000474136 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
APP-215ENST00000474136 KRTAP5-1Q6L8H4 278 aa5.73□□□□□ -1.49
APP-215ENST00000474136 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
APP-215ENST00000474136 NDUFAF8A1L188 74 aa5.53□□□□□ -1.52
APP-215ENST00000474136 MT3P25713 68 aa5.5□□□□□ -1.53
APP-215ENST00000474136 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
APP-215ENST00000474136 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
APP-215ENST00000474136 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
APP-215ENST00000474136 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
APP-215ENST00000474136 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
APP-215ENST00000474136 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
APP-215ENST00000474136 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
APP-215ENST00000474136 INE1O15225 51 aa4.7□□□□□ -1.66
APP-215ENST00000474136 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
APP-215ENST00000474136 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
APP-215ENST00000474136 PHGR1C9JFL3 82 aa4.39□□□□□ -1.71
APP-215ENST00000474136 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
APP-215ENST00000474136 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
APP-215ENST00000474136 PRM1P04553 51 aa3.96□□□□□ -1.77
APP-215ENST00000474136 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
APP-215ENST00000474136 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
APP-215ENST00000474136 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
APP-215ENST00000474136 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 35.6 ms