RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 UQCR11O14957 56 aa2.57□□□□□ -2
FN1-219ENST00000474036 SPATA8Q6RVD6 105 aa2.57□□□□□ -2
FN1-219ENST00000474036 LINC01554Q52M75 96 aa2.56□□□□□ -2
FN1-219ENST00000474036 PP632Q6XCG6 107 aa2.55□□□□□ -2
FN1-219ENST00000474036 MT2AP02795 61 aa2.53□□□□□ -2
FN1-219ENST00000474036 KRTAP10-10P60014 251 aa2.53□□□□□ -2
FN1-219ENST00000474036 H1FX-AS1Q4G0G2 97 aa2.53□□□□□ -2
FN1-219ENST00000474036 S4R3F8 94 aa2.53□□□□□ -2
FN1-219ENST00000474036 A0A1B0GU33 70 aa2.52□□□□□ -2.01
FN1-219ENST00000474036 MT1FP04733 61 aa2.52□□□□□ -2.01
FN1-219ENST00000474036 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
FN1-219ENST00000474036 H0YAA0 97 aa2.51□□□□□ -2.01
FN1-219ENST00000474036 ADM2Q7Z4H4 148 aa2.48□□□□□ -2.01
FN1-219ENST00000474036 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
FN1-219ENST00000474036 A0A0D9SG42 100 aa2.46□□□□□ -2.02
FN1-219ENST00000474036 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
FN1-219ENST00000474036 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
FN1-219ENST00000474036 P0C880 135 aa2.45□□□□□ -2.02
FN1-219ENST00000474036 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
FN1-219ENST00000474036 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
FN1-219ENST00000474036 K7ERS5 55 aa2.43□□□□□ -2.02
FN1-219ENST00000474036 CSAG1Q6PB30 78 aa2.43□□□□□ -2.02
FN1-219ENST00000474036 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
FN1-219ENST00000474036 KMT2DO14686 5537 aa2.38□□□□□ -2.03
FN1-219ENST00000474036 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
FN1-219ENST00000474036 SPINT4Q6UDR6 99 aa2.37□□□□□ -2.03
FN1-219ENST00000474036 CRIPTQ9P021 101 aa2.37□□□□□ -2.03
FN1-219ENST00000474036 M0QZ58 72 aa2.36□□□□□ -2.03
FN1-219ENST00000474036 SPRR2EP22531 72 aa2.36□□□□□ -2.03
FN1-219ENST00000474036 SPRR2BP35325 72 aa2.36□□□□□ -2.03
FN1-219ENST00000474036 SPRR2AP35326 72 aa2.36□□□□□ -2.03
FN1-219ENST00000474036 ROMO1P60602 79 aa2.36□□□□□ -2.03
FN1-219ENST00000474036 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
FN1-219ENST00000474036 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
FN1-219ENST00000474036 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
FN1-219ENST00000474036 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
FN1-219ENST00000474036 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
FN1-219ENST00000474036 R4GN34 69 aa2.32□□□□□ -2.04
FN1-219ENST00000474036 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
FN1-219ENST00000474036 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
FN1-219ENST00000474036 SPRR2DP22532 72 aa2.29□□□□□ -2.04
FN1-219ENST00000474036 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
FN1-219ENST00000474036 MT1BP07438 61 aa2.19□□□□□ -2.06
FN1-219ENST00000474036 KRTAP8-1Q8IUC2 63 aa2.16□□□□□ -2.06
FN1-219ENST00000474036 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
FN1-219ENST00000474036 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
FN1-219ENST00000474036 TNP1P09430 55 aa2.1□□□□□ -2.07
FN1-219ENST00000474036 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
FN1-219ENST00000474036 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
FN1-219ENST00000474036 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
FN1-219ENST00000474036 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
FN1-219ENST00000474036 MT4P47944 62 aa2.05□□□□□ -2.08
FN1-219ENST00000474036 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
FN1-219ENST00000474036 MT1XP80297 61 aa2.02□□□□□ -2.09
FN1-219ENST00000474036 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
FN1-219ENST00000474036 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
FN1-219ENST00000474036 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
FN1-219ENST00000474036 INE1O15225 51 aa1.89□□□□□ -2.11
FN1-219ENST00000474036 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
FN1-219ENST00000474036 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
FN1-219ENST00000474036 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
FN1-219ENST00000474036 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
FN1-219ENST00000474036 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
FN1-219ENST00000474036 MT1EP04732 61 aa1.77□□□□□ -2.13
FN1-219ENST00000474036 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
FN1-219ENST00000474036 MT1LQ93083 61 aa1.75□□□□□ -2.13
FN1-219ENST00000474036 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
FN1-219ENST00000474036 MT1MQ8N339 61 aa1.72□□□□□ -2.13
FN1-219ENST00000474036 MT1GP13640 62 aa1.71□□□□□ -2.14
FN1-219ENST00000474036 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
FN1-219ENST00000474036 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
FN1-219ENST00000474036 MT1AP04731 61 aa1.48□□□□□ -2.17
FN1-219ENST00000474036 KRTAP6-1Q3LI64 71 aa1.48□□□□□ -2.17
FN1-219ENST00000474036 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
FN1-219ENST00000474036 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
FN1-219ENST00000474036 PRM1P04553 51 aa1.26□□□□□ -2.21
FN1-219ENST00000474036 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
FN1-219ENST00000474036 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms