RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
CLIC3-201ENST00000473911 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
CLIC3-201ENST00000473911 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
CLIC3-201ENST00000473911 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
CLIC3-201ENST00000473911 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CLIC3-201ENST00000473911 A8MU10 97 aa5.68□□□□□ -1.5
CLIC3-201ENST00000473911 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
CLIC3-201ENST00000473911 AHNAK2Q8IVF2 5795 aa5.62□□□□□ -1.51
CLIC3-201ENST00000473911 MT1GP13640 62 aa5.62□□□□□ -1.51
CLIC3-201ENST00000473911 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
CLIC3-201ENST00000473911 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
CLIC3-201ENST00000473911 TNP1P09430 55 aa5.58□□□□□ -1.52
CLIC3-201ENST00000473911 MT4P47944 62 aa5.58□□□□□ -1.52
CLIC3-201ENST00000473911 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
CLIC3-201ENST00000473911 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
CLIC3-201ENST00000473911 MT1LQ93083 61 aa5.53□□□□□ -1.52
CLIC3-201ENST00000473911 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
CLIC3-201ENST00000473911 MT1MQ8N339 61 aa5.52□□□□□ -1.53
CLIC3-201ENST00000473911 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
CLIC3-201ENST00000473911 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
CLIC3-201ENST00000473911 K7ERS5 55 aa5.47□□□□□ -1.53
CLIC3-201ENST00000473911 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
CLIC3-201ENST00000473911 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
CLIC3-201ENST00000473911 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
CLIC3-201ENST00000473911 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
CLIC3-201ENST00000473911 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
CLIC3-201ENST00000473911 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
CLIC3-201ENST00000473911 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
CLIC3-201ENST00000473911 ROMO1P60602 79 aa5.23□□□□□ -1.57
CLIC3-201ENST00000473911 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
CLIC3-201ENST00000473911 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
CLIC3-201ENST00000473911 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
CLIC3-201ENST00000473911 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
CLIC3-201ENST00000473911 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
CLIC3-201ENST00000473911 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
CLIC3-201ENST00000473911 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
CLIC3-201ENST00000473911 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
CLIC3-201ENST00000473911 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
CLIC3-201ENST00000473911 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
CLIC3-201ENST00000473911 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
CLIC3-201ENST00000473911 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
CLIC3-201ENST00000473911 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
CLIC3-201ENST00000473911 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
CLIC3-201ENST00000473911 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
CLIC3-201ENST00000473911 MT1AP04731 61 aa4.71□□□□□ -1.66
CLIC3-201ENST00000473911 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
CLIC3-201ENST00000473911 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
CLIC3-201ENST00000473911 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
CLIC3-201ENST00000473911 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
CLIC3-201ENST00000473911 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
CLIC3-201ENST00000473911 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
CLIC3-201ENST00000473911 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
CLIC3-201ENST00000473911 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
CLIC3-201ENST00000473911 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
CLIC3-201ENST00000473911 MT3P25713 68 aa4.33□□□□□ -1.72
CLIC3-201ENST00000473911 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
CLIC3-201ENST00000473911 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
CLIC3-201ENST00000473911 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
CLIC3-201ENST00000473911 H3BS24 57 aa3.97□□□□□ -1.77
CLIC3-201ENST00000473911 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
CLIC3-201ENST00000473911 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
CLIC3-201ENST00000473911 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
CLIC3-201ENST00000473911 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
CLIC3-201ENST00000473911 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
CLIC3-201ENST00000473911 INE1O15225 51 aa3.65□□□□□ -1.83
CLIC3-201ENST00000473911 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
CLIC3-201ENST00000473911 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
CLIC3-201ENST00000473911 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
CLIC3-201ENST00000473911 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CLIC3-201ENST00000473911 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CLIC3-201ENST00000473911 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CLIC3-201ENST00000473911 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
CLIC3-201ENST00000473911 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CLIC3-201ENST00000473911 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CLIC3-201ENST00000473911 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
CLIC3-201ENST00000473911 PRM1P04553 51 aa2.67□□□□□ -1.98
CLIC3-201ENST00000473911 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
CLIC3-201ENST00000473911 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 58.3 ms