RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
SNX4-204ENST00000473417 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
SNX4-204ENST00000473417 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
SNX4-204ENST00000473417 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
SNX4-204ENST00000473417 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
SNX4-204ENST00000473417 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
SNX4-204ENST00000473417 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
SNX4-204ENST00000473417 MT1GP13640 62 aa6.49□□□□□ -1.37
SNX4-204ENST00000473417 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
SNX4-204ENST00000473417 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
SNX4-204ENST00000473417 MT1LQ93083 61 aa6.42□□□□□ -1.38
SNX4-204ENST00000473417 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
SNX4-204ENST00000473417 MT1MQ8N339 61 aa6.39□□□□□ -1.39
SNX4-204ENST00000473417 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
SNX4-204ENST00000473417 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
SNX4-204ENST00000473417 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
SNX4-204ENST00000473417 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
SNX4-204ENST00000473417 ROMO1P60602 79 aa6.28□□□□□ -1.4
SNX4-204ENST00000473417 MT4P47944 62 aa6.25□□□□□ -1.41
SNX4-204ENST00000473417 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
SNX4-204ENST00000473417 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
SNX4-204ENST00000473417 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
SNX4-204ENST00000473417 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
SNX4-204ENST00000473417 AHNAK2Q8IVF2 5795 aa6.14□□□□□ -1.43
SNX4-204ENST00000473417 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
SNX4-204ENST00000473417 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
SNX4-204ENST00000473417 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
SNX4-204ENST00000473417 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
SNX4-204ENST00000473417 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SNX4-204ENST00000473417 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
SNX4-204ENST00000473417 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
SNX4-204ENST00000473417 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
SNX4-204ENST00000473417 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
SNX4-204ENST00000473417 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
SNX4-204ENST00000473417 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
SNX4-204ENST00000473417 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
SNX4-204ENST00000473417 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
SNX4-204ENST00000473417 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
SNX4-204ENST00000473417 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
SNX4-204ENST00000473417 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
SNX4-204ENST00000473417 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
SNX4-204ENST00000473417 MT1AP04731 61 aa5.46□□□□□ -1.54
SNX4-204ENST00000473417 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
SNX4-204ENST00000473417 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
SNX4-204ENST00000473417 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
SNX4-204ENST00000473417 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
SNX4-204ENST00000473417 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
SNX4-204ENST00000473417 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
SNX4-204ENST00000473417 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
SNX4-204ENST00000473417 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
SNX4-204ENST00000473417 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
SNX4-204ENST00000473417 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
SNX4-204ENST00000473417 MUC5ACP98088 5654 aa5.09□□□□□ -1.6
SNX4-204ENST00000473417 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
SNX4-204ENST00000473417 MUC5BQ9HC84 5762 aaPredicted RBP5.07□□□□□ -1.6
SNX4-204ENST00000473417 MT3P25713 68 aa4.98□□□□□ -1.61
SNX4-204ENST00000473417 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
SNX4-204ENST00000473417 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
SNX4-204ENST00000473417 H3BS24 57 aa4.67□□□□□ -1.66
SNX4-204ENST00000473417 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
SNX4-204ENST00000473417 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
SNX4-204ENST00000473417 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
SNX4-204ENST00000473417 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
SNX4-204ENST00000473417 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
SNX4-204ENST00000473417 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
SNX4-204ENST00000473417 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
SNX4-204ENST00000473417 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
SNX4-204ENST00000473417 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
SNX4-204ENST00000473417 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
SNX4-204ENST00000473417 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
SNX4-204ENST00000473417 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
SNX4-204ENST00000473417 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
SNX4-204ENST00000473417 PRM1P04553 51 aa3.25□□□□□ -1.89
SNX4-204ENST00000473417 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
SNX4-204ENST00000473417 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
SNX4-204ENST00000473417 INE1O15225 51 aa3.12□□□□□ -1.91
SNX4-204ENST00000473417 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
SNX4-204ENST00000473417 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 77.3 ms