RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 LCE1DQ5T752 114 aa7.69□□□□□ -1.18
APTX-218ENST00000473270 KRTAP4-9Q9BYQ8 210 aa7.54□□□□□ -1.2
APTX-218ENST00000473270 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
APTX-218ENST00000473270 KRTAP4-2Q9BYR5 136 aa7.5□□□□□ -1.21
APTX-218ENST00000473270 C10orf95Q9H7T3 257 aa7.5□□□□□ -1.21
APTX-218ENST00000473270 TNP1P09430 55 aa7.45□□□□□ -1.22
APTX-218ENST00000473270 GPR98Q8WXG9 6306 aa7.36□□□□□ -1.23
APTX-218ENST00000473270 DSTQ03001 7570 aaKnown RBP7.35□□□□□ -1.23
APTX-218ENST00000473270 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
APTX-218ENST00000473270 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
APTX-218ENST00000473270 KRTAP19-3Q7Z4W3 81 aa7.28□□□□□ -1.24
APTX-218ENST00000473270 BRK1Q8WUW1 75 aa7.26□□□□□ -1.25
APTX-218ENST00000473270 MT1EP04732 61 aa7.23□□□□□ -1.25
APTX-218ENST00000473270 KRTAP19-7Q3SYF9 63 aa7.23□□□□□ -1.25
APTX-218ENST00000473270 ROMO1P60602 79 aa7.21□□□□□ -1.26
APTX-218ENST00000473270 KRTAP4-11Q9BYQ6 195 aa7.19□□□□□ -1.26
APTX-218ENST00000473270 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
APTX-218ENST00000473270 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
APTX-218ENST00000473270 MT1GP13640 62 aa7.1□□□□□ -1.27
APTX-218ENST00000473270 KRTAP5-3Q6L8H2 238 aa7.1□□□□□ -1.27
APTX-218ENST00000473270 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
APTX-218ENST00000473270 LCE4AQ5TA78 99 aa7.05□□□□□ -1.28
APTX-218ENST00000473270 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
APTX-218ENST00000473270 MT4P47944 62 aa7.03□□□□□ -1.28
APTX-218ENST00000473270 HMCN1Q96RW7 5635 aa6.96□□□□□ -1.3
APTX-218ENST00000473270 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
APTX-218ENST00000473270 MT1MQ8N339 61 aa6.92□□□□□ -1.3
APTX-218ENST00000473270 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
APTX-218ENST00000473270 MT1LQ93083 61 aa6.86□□□□□ -1.31
APTX-218ENST00000473270 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
APTX-218ENST00000473270 AHNAK2Q8IVF2 5795 aa6.78□□□□□ -1.32
APTX-218ENST00000473270 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
APTX-218ENST00000473270 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
APTX-218ENST00000473270 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
APTX-218ENST00000473270 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
APTX-218ENST00000473270 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
APTX-218ENST00000473270 KRTAP5-7Q6L8G8 165 aa6.54□□□□□ -1.36
APTX-218ENST00000473270 KRTAP12-4P60329 112 aa6.44□□□□□ -1.38
APTX-218ENST00000473270 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
APTX-218ENST00000473270 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
APTX-218ENST00000473270 PRAC1Q96KF2 57 aa6.42□□□□□ -1.38
APTX-218ENST00000473270 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
APTX-218ENST00000473270 KTN1-AS1Q86SY8 53 aa6.37□□□□□ -1.39
APTX-218ENST00000473270 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
APTX-218ENST00000473270 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
APTX-218ENST00000473270 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
APTX-218ENST00000473270 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
APTX-218ENST00000473270 MT1AP04731 61 aa5.85□□□□□ -1.47
APTX-218ENST00000473270 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
APTX-218ENST00000473270 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
APTX-218ENST00000473270 KRTAP5-8O75690 187 aa5.73□□□□□ -1.49
APTX-218ENST00000473270 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
APTX-218ENST00000473270 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
APTX-218ENST00000473270 MUC5BQ9HC84 5762 aaPredicted RBP5.66□□□□□ -1.5
APTX-218ENST00000473270 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
APTX-218ENST00000473270 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
APTX-218ENST00000473270 LUZP6Q538Z0 58 aa5.45□□□□□ -1.54
APTX-218ENST00000473270 MT3P25713 68 aa5.44□□□□□ -1.54
APTX-218ENST00000473270 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
APTX-218ENST00000473270 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.17□□□□□ -1.58
APTX-218ENST00000473270 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
APTX-218ENST00000473270 H3BS24 57 aa4.96□□□□□ -1.62
APTX-218ENST00000473270 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
APTX-218ENST00000473270 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
APTX-218ENST00000473270 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
APTX-218ENST00000473270 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
APTX-218ENST00000473270 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
APTX-218ENST00000473270 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
APTX-218ENST00000473270 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
APTX-218ENST00000473270 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
APTX-218ENST00000473270 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
APTX-218ENST00000473270 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
APTX-218ENST00000473270 INE1O15225 51 aa4.01□□□□□ -1.77
APTX-218ENST00000473270 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
APTX-218ENST00000473270 PRM1P04553 51 aa3.7□□□□□ -1.82
APTX-218ENST00000473270 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
APTX-218ENST00000473270 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
APTX-218ENST00000473270 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 38.9 ms