RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 A0A1B0GU33 70 aa3.75□□□□□ -1.81
SCAMP3-205ENST00000472397 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
SCAMP3-205ENST00000472397 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
SCAMP3-205ENST00000472397 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
SCAMP3-205ENST00000472397 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
SCAMP3-205ENST00000472397 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
SCAMP3-205ENST00000472397 A0A0D9SG42 100 aa3.73□□□□□ -1.81
SCAMP3-205ENST00000472397 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
SCAMP3-205ENST00000472397 SMIM26A0A096LP01 95 aa3.71□□□□□ -1.82
SCAMP3-205ENST00000472397 RPS28P62857 69 aaKnown RBP3.7□□□□□ -1.82
SCAMP3-205ENST00000472397 PSPHP1O15172 72 aa3.69□□□□□ -1.82
SCAMP3-205ENST00000472397 V9GYY9 64 aa3.69□□□□□ -1.82
SCAMP3-205ENST00000472397 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
SCAMP3-205ENST00000472397 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
SCAMP3-205ENST00000472397 A8MU10 97 aa3.65□□□□□ -1.83
SCAMP3-205ENST00000472397 Q1T7F1 81 aa3.65□□□□□ -1.83
SCAMP3-205ENST00000472397 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
SCAMP3-205ENST00000472397 UQCR11O14957 56 aa3.63□□□□□ -1.83
SCAMP3-205ENST00000472397 MT1GP13640 62 aa3.62□□□□□ -1.83
SCAMP3-205ENST00000472397 MT1MQ8N339 61 aa3.62□□□□□ -1.83
SCAMP3-205ENST00000472397 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
SCAMP3-205ENST00000472397 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
SCAMP3-205ENST00000472397 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
SCAMP3-205ENST00000472397 A6NED7 52 aa3.58□□□□□ -1.84
SCAMP3-205ENST00000472397 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
SCAMP3-205ENST00000472397 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
SCAMP3-205ENST00000472397 MT1LQ93083 61 aa3.56□□□□□ -1.84
SCAMP3-205ENST00000472397 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
SCAMP3-205ENST00000472397 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
SCAMP3-205ENST00000472397 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
SCAMP3-205ENST00000472397 K7ERS5 55 aa3.48□□□□□ -1.85
SCAMP3-205ENST00000472397 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
SCAMP3-205ENST00000472397 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
SCAMP3-205ENST00000472397 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
SCAMP3-205ENST00000472397 MT3P25713 68 aa3.44□□□□□ -1.86
SCAMP3-205ENST00000472397 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
SCAMP3-205ENST00000472397 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
SCAMP3-205ENST00000472397 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
SCAMP3-205ENST00000472397 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
SCAMP3-205ENST00000472397 TNP1P09430 55 aa3.36□□□□□ -1.87
SCAMP3-205ENST00000472397 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
SCAMP3-205ENST00000472397 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
SCAMP3-205ENST00000472397 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
SCAMP3-205ENST00000472397 ROMO1P60602 79 aa3.28□□□□□ -1.88
SCAMP3-205ENST00000472397 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
SCAMP3-205ENST00000472397 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
SCAMP3-205ENST00000472397 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SCAMP3-205ENST00000472397 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
SCAMP3-205ENST00000472397 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
SCAMP3-205ENST00000472397 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
SCAMP3-205ENST00000472397 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
SCAMP3-205ENST00000472397 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
SCAMP3-205ENST00000472397 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
SCAMP3-205ENST00000472397 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SCAMP3-205ENST00000472397 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
SCAMP3-205ENST00000472397 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
SCAMP3-205ENST00000472397 MT1AP04731 61 aa3.01□□□□□ -1.93
SCAMP3-205ENST00000472397 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
SCAMP3-205ENST00000472397 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
SCAMP3-205ENST00000472397 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
SCAMP3-205ENST00000472397 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
SCAMP3-205ENST00000472397 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
SCAMP3-205ENST00000472397 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
SCAMP3-205ENST00000472397 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
SCAMP3-205ENST00000472397 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
SCAMP3-205ENST00000472397 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
SCAMP3-205ENST00000472397 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
SCAMP3-205ENST00000472397 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
SCAMP3-205ENST00000472397 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
SCAMP3-205ENST00000472397 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
SCAMP3-205ENST00000472397 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
SCAMP3-205ENST00000472397 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
SCAMP3-205ENST00000472397 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SCAMP3-205ENST00000472397 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
SCAMP3-205ENST00000472397 INE1O15225 51 aa1.81□□□□□ -2.12
SCAMP3-205ENST00000472397 PRM1P04553 51 aa1.71□□□□□ -2.14
SCAMP3-205ENST00000472397 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
SCAMP3-205ENST00000472397 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 129.4 ms