RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
TSPAN1-205ENST00000472170 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
TSPAN1-205ENST00000472170 KRTAP13-4Q3LI77 160 aa3.32□□□□□ -1.88
TSPAN1-205ENST00000472170 KRTAP4-8A0A0G2JLE6 195 aa3.31□□□□□ -1.88
TSPAN1-205ENST00000472170 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
TSPAN1-205ENST00000472170 KRTAP4-8Q9BYQ9 185 aa3.31□□□□□ -1.88
TSPAN1-205ENST00000472170 SPRR2DP22532 72 aa3.27□□□□□ -1.89
TSPAN1-205ENST00000472170 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
TSPAN1-205ENST00000472170 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
TSPAN1-205ENST00000472170 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
TSPAN1-205ENST00000472170 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
TSPAN1-205ENST00000472170 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
TSPAN1-205ENST00000472170 TNP1P09430 55 aa3.16□□□□□ -1.9
TSPAN1-205ENST00000472170 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
TSPAN1-205ENST00000472170 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
TSPAN1-205ENST00000472170 INE1O15225 51 aa3.1□□□□□ -1.91
TSPAN1-205ENST00000472170 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
TSPAN1-205ENST00000472170 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
TSPAN1-205ENST00000472170 MT1EP04732 61 aa3.08□□□□□ -1.92
TSPAN1-205ENST00000472170 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
TSPAN1-205ENST00000472170 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
TSPAN1-205ENST00000472170 MT1GP13640 62 aa3.06□□□□□ -1.92
TSPAN1-205ENST00000472170 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
TSPAN1-205ENST00000472170 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
TSPAN1-205ENST00000472170 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
TSPAN1-205ENST00000472170 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
TSPAN1-205ENST00000472170 MT1LQ93083 61 aa2.95□□□□□ -1.94
TSPAN1-205ENST00000472170 MT1MQ8N339 61 aa2.94□□□□□ -1.94
TSPAN1-205ENST00000472170 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
TSPAN1-205ENST00000472170 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
TSPAN1-205ENST00000472170 MT4P47944 62 aa2.88□□□□□ -1.95
TSPAN1-205ENST00000472170 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
TSPAN1-205ENST00000472170 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
TSPAN1-205ENST00000472170 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
TSPAN1-205ENST00000472170 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
TSPAN1-205ENST00000472170 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
TSPAN1-205ENST00000472170 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
TSPAN1-205ENST00000472170 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
TSPAN1-205ENST00000472170 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
TSPAN1-205ENST00000472170 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
TSPAN1-205ENST00000472170 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
TSPAN1-205ENST00000472170 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
TSPAN1-205ENST00000472170 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
TSPAN1-205ENST00000472170 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
TSPAN1-205ENST00000472170 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
TSPAN1-205ENST00000472170 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
TSPAN1-205ENST00000472170 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
TSPAN1-205ENST00000472170 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
TSPAN1-205ENST00000472170 MT1AP04731 61 aa2.54□□□□□ -2
TSPAN1-205ENST00000472170 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
TSPAN1-205ENST00000472170 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
TSPAN1-205ENST00000472170 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
TSPAN1-205ENST00000472170 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
TSPAN1-205ENST00000472170 MT3P25713 68 aa2.42□□□□□ -2.02
TSPAN1-205ENST00000472170 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
TSPAN1-205ENST00000472170 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
TSPAN1-205ENST00000472170 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
TSPAN1-205ENST00000472170 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
TSPAN1-205ENST00000472170 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
TSPAN1-205ENST00000472170 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
TSPAN1-205ENST00000472170 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
TSPAN1-205ENST00000472170 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
TSPAN1-205ENST00000472170 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
TSPAN1-205ENST00000472170 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
TSPAN1-205ENST00000472170 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
TSPAN1-205ENST00000472170 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
TSPAN1-205ENST00000472170 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
TSPAN1-205ENST00000472170 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
TSPAN1-205ENST00000472170 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
TSPAN1-205ENST00000472170 PRM1P04553 51 aa1.9□□□□□ -2.11
TSPAN1-205ENST00000472170 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
TSPAN1-205ENST00000472170 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
TSPAN1-205ENST00000472170 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
TSPAN1-205ENST00000472170 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
TSPAN1-205ENST00000472170 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
TSPAN1-205ENST00000472170 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
TSPAN1-205ENST00000472170 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
TSPAN1-205ENST00000472170 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 66.5 ms