RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
SYN3-211ENST00000472027 MT1EP04732 61 aa3.4□□□□□ -1.87
SYN3-211ENST00000472027 PCP4P48539 62 aa3.39□□□□□ -1.87
SYN3-211ENST00000472027 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
SYN3-211ENST00000472027 UQCR11O14957 56 aa3.38□□□□□ -1.87
SYN3-211ENST00000472027 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
SYN3-211ENST00000472027 TNP1P09430 55 aa3.36□□□□□ -1.87
SYN3-211ENST00000472027 KRTAP19-3Q7Z4W3 81 aa3.36□□□□□ -1.87
SYN3-211ENST00000472027 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
SYN3-211ENST00000472027 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
SYN3-211ENST00000472027 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
SYN3-211ENST00000472027 MIR22HGQ0VDD5 57 aa3.31□□□□□ -1.88
SYN3-211ENST00000472027 MT1GP13640 62 aa3.3□□□□□ -1.88
SYN3-211ENST00000472027 V9GYY9 64 aa3.3□□□□□ -1.88
SYN3-211ENST00000472027 PSPHP1O15172 72 aa3.28□□□□□ -1.88
SYN3-211ENST00000472027 Q1T7F1 81 aa3.28□□□□□ -1.88
SYN3-211ENST00000472027 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
SYN3-211ENST00000472027 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
SYN3-211ENST00000472027 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
SYN3-211ENST00000472027 MT1LQ93083 61 aa3.26□□□□□ -1.89
SYN3-211ENST00000472027 K7ERS5 55 aa3.23□□□□□ -1.89
SYN3-211ENST00000472027 MT1MQ8N339 61 aa3.23□□□□□ -1.89
SYN3-211ENST00000472027 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
SYN3-211ENST00000472027 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
SYN3-211ENST00000472027 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
SYN3-211ENST00000472027 A6NED7 52 aa3.17□□□□□ -1.9
SYN3-211ENST00000472027 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
SYN3-211ENST00000472027 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
SYN3-211ENST00000472027 MT4P47944 62 aa3.06□□□□□ -1.92
SYN3-211ENST00000472027 CDC42SE1Q9NRR8 79 aa3.06□□□□□ -1.92
SYN3-211ENST00000472027 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
SYN3-211ENST00000472027 ROMO1P60602 79 aa3.03□□□□□ -1.92
SYN3-211ENST00000472027 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
SYN3-211ENST00000472027 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
SYN3-211ENST00000472027 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
SYN3-211ENST00000472027 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SYN3-211ENST00000472027 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
SYN3-211ENST00000472027 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
SYN3-211ENST00000472027 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
SYN3-211ENST00000472027 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
SYN3-211ENST00000472027 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
SYN3-211ENST00000472027 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
SYN3-211ENST00000472027 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
SYN3-211ENST00000472027 MT1AP04731 61 aa2.77□□□□□ -1.97
SYN3-211ENST00000472027 BRK1Q8WUW1 75 aa2.77□□□□□ -1.97
SYN3-211ENST00000472027 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
SYN3-211ENST00000472027 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SYN3-211ENST00000472027 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
SYN3-211ENST00000472027 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
SYN3-211ENST00000472027 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
SYN3-211ENST00000472027 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
SYN3-211ENST00000472027 MT3P25713 68 aa2.55□□□□□ -2
SYN3-211ENST00000472027 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SYN3-211ENST00000472027 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
SYN3-211ENST00000472027 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
SYN3-211ENST00000472027 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
SYN3-211ENST00000472027 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
SYN3-211ENST00000472027 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
SYN3-211ENST00000472027 PRO0628Q9UI54 55 aa2.44□□□□□ -2.02
SYN3-211ENST00000472027 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
SYN3-211ENST00000472027 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
SYN3-211ENST00000472027 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
SYN3-211ENST00000472027 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
SYN3-211ENST00000472027 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
SYN3-211ENST00000472027 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
SYN3-211ENST00000472027 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SYN3-211ENST00000472027 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
SYN3-211ENST00000472027 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
SYN3-211ENST00000472027 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
SYN3-211ENST00000472027 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
SYN3-211ENST00000472027 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
SYN3-211ENST00000472027 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
SYN3-211ENST00000472027 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
SYN3-211ENST00000472027 PRM1P04553 51 aa1.55□□□□□ -2.16
SYN3-211ENST00000472027 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SYN3-211ENST00000472027 INE1O15225 51 aa1.42□□□□□ -2.18
SYN3-211ENST00000472027 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
SYN3-211ENST00000472027 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 216.4 ms