RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 AGLP35573 1532 aa-5.6□□□□□ -3.31
PRPF40A-207ENST00000471701 USP34Q70CQ2 3546 aa-5.61□□□□□ -3.31
PRPF40A-207ENST00000471701 SMCO4Q9NRQ5 59 aa-5.61□□□□□ -3.31
PRPF40A-207ENST00000471701 PDCD5O14737 125 aa-5.63□□□□□ -3.31
PRPF40A-207ENST00000471701 MKI67P46013 3256 aaKnown RBP-5.64□□□□□ -3.31
PRPF40A-207ENST00000471701 CPS1P31327 1500 aa-5.66□□□□□ -3.32
PRPF40A-207ENST00000471701 CFAP47Q6ZTR5 3102 aa-5.69□□□□□ -3.32
PRPF40A-207ENST00000471701 DNAH12Q6ZR08 3092 aa-5.69□□□□□ -3.32
PRPF40A-207ENST00000471701 EFCAB5A4FU69 1503 aa-5.7□□□□□ -3.32
PRPF40A-207ENST00000471701 PLNP26678 52 aa-5.71□□□□□ -3.32
PRPF40A-207ENST00000471701 TTTY10Q9BZA0 68 aa-5.71□□□□□ -3.32
PRPF40A-207ENST00000471701 SMIM2Q9BVW6 85 aa-5.72□□□□□ -3.33
PRPF40A-207ENST00000471701 CLTCL1P53675 1640 aa-5.74□□□□□ -3.33
PRPF40A-207ENST00000471701 ABCA10Q8WWZ4 1543 aa-5.75□□□□□ -3.33
PRPF40A-207ENST00000471701 ABCA5Q8WWZ7 1642 aa-5.76□□□□□ -3.33
PRPF40A-207ENST00000471701 XIRP2A4UGR9 3374 aa-5.78□□□□□ -3.33
PRPF40A-207ENST00000471701 DDX60Q8IY21 1712 aaKnown RBP-5.79□□□□□ -3.34
PRPF40A-207ENST00000471701 TRPM2O94759 1503 aa-5.83□□□□□ -3.34
PRPF40A-207ENST00000471701 IQGAP1P46940 1657 aa-5.84□□□□□ -3.34
PRPF40A-207ENST00000471701 UNC80Q8N2C7 3258 aa-5.84□□□□□ -3.34
PRPF40A-207ENST00000471701 NFAT5O94916 1531 aa-5.88□□□□□ -3.35
PRPF40A-207ENST00000471701 LOC400499M0QZD8 3231 aa-5.9□□□□□ -3.35
PRPF40A-207ENST00000471701 A0A087WWC5 75 aa-5.97□□□□□ -3.37
PRPF40A-207ENST00000471701 DEFB133Q30KQ1 61 aa-6.01□□□□□ -3.37
PRPF40A-207ENST00000471701 PRXQ9BXM0 1461 aa-6.03□□□□□ -3.38
PRPF40A-207ENST00000471701 RHPN1-AS1Q9BWJ2 59 aa-6.05□□□□□ -3.38
PRPF40A-207ENST00000471701 ASPMQ8IZT6 3477 aa-6.09□□□□□ -3.38
PRPF40A-207ENST00000471701 NDUFA1O15239 70 aa-6.11□□□□□ -3.39
PRPF40A-207ENST00000471701 TOMM7Q9P0U1 55 aa-6.11□□□□□ -3.39
PRPF40A-207ENST00000471701 LINC01590Q5TEZ4 76 aa-6.16□□□□□ -3.4
PRPF40A-207ENST00000471701 ABCC8Q09428 1581 aa-6.17□□□□□ -3.4
PRPF40A-207ENST00000471701 SMIM5Q71RC9 77 aa-6.17□□□□□ -3.4
PRPF40A-207ENST00000471701 KRTAP19-2Q3LHN2 52 aa-6.19□□□□□ -3.4
PRPF40A-207ENST00000471701 ADCY10Q96PN6 1610 aa-6.19□□□□□ -3.4
PRPF40A-207ENST00000471701 FANCD2Q9BXW9 1451 aa-6.21□□□□□ -3.4
PRPF40A-207ENST00000471701 HTN1P15515 57 aa-6.23□□□□□ -3.41
PRPF40A-207ENST00000471701 A0A096LNI7 61 aa-6.24□□□□□ -3.41
PRPF40A-207ENST00000471701 BRCA2P51587 3418 aa-6.25□□□□□ -3.41
PRPF40A-207ENST00000471701 CMC2Q9NRP2 79 aa-6.3□□□□□ -3.42
PRPF40A-207ENST00000471701 CD52P31358 61 aa-6.33□□□□□ -3.42
PRPF40A-207ENST00000471701 CENPFP49454 3210 aa-6.39□□□□□ -3.43
PRPF40A-207ENST00000471701 VCANP13611 3396 aa-6.43□□□□□ -3.44
PRPF40A-207ENST00000471701 CDH23Q9H251 3354 aa-6.44□□□□□ -3.44
PRPF40A-207ENST00000471701 DUOX1Q9NRD9 1551 aa-6.48□□□□□ -3.45
PRPF40A-207ENST00000471701 ERICH3Q5RHP9 1530 aa-6.51□□□□□ -3.45
PRPF40A-207ENST00000471701 DEFB124Q8NES8 71 aa-6.56□□□□□ -3.46
PRPF40A-207ENST00000471701 VPS13AQ96RL7 3174 aa-6.64□□□□□ -3.47
PRPF40A-207ENST00000471701 SAMD9LQ8IVG5 1584 aa-6.69□□□□□ -3.48
PRPF40A-207ENST00000471701 RPL39P62891 51 aaKnown RBP-6.71□□□□□ -3.48
PRPF40A-207ENST00000471701 TOP2AP11388 1531 aaKnown RBP-6.76□□□□□ -3.49
PRPF40A-207ENST00000471701 RPL39LQ96EH5 51 aaKnown RBP-6.94□□□□□ -3.52
PRPF40A-207ENST00000471701 ATP7AQ04656 1500 aa-6.99□□□□□ -3.53
PRPF40A-207ENST00000471701 LINC01556Q5JQF7 62 aa-7.04□□□□□ -3.54
PRPF40A-207ENST00000471701 MROH2BQ7Z745 1585 aa-7.04□□□□□ -3.54
PRPF40A-207ENST00000471701 DEFB104AQ8WTQ1 72 aa-7.06□□□□□ -3.54
PRPF40A-207ENST00000471701 SMIM31A0A1B0GVY4 71 aa-7.09□□□□□ -3.54
PRPF40A-207ENST00000471701 SNRPGP15A8MWD9 76 aa-7.24□□□□□ -3.57
PRPF40A-207ENST00000471701 UTRNP46939 3433 aa-7.24□□□□□ -3.57
PRPF40A-207ENST00000471701 H3BUX3 64 aa-7.29□□□□□ -3.58
PRPF40A-207ENST00000471701 IQGAP2Q13576 1575 aa-7.35□□□□□ -3.59
PRPF40A-207ENST00000471701 TOMM5Q8N4H5 51 aa-7.64□□□□□ -3.63
PRPF40A-207ENST00000471701 APELAP0DMC3 54 aa-7.73□□□□□ -3.65
PRPF40A-207ENST00000471701 K7EIM0 57 aa-7.75□□□□□ -3.65
PRPF40A-207ENST00000471701 A0A096LPF7 62 aa-7.81□□□□□ -3.66
PRPF40A-207ENST00000471701 ARHGAP5-AS1Q96IT6 56 aa-7.98□□□□□ -3.69
PRPF40A-207ENST00000471701 PRCDQ00LT1 54 aa-8.05□□□□□ -3.7
PRPF40A-207ENST00000471701 TMEM167AQ8TBQ9 72 aa-8.19□□□□□ -3.72
PRPF40A-207ENST00000471701 HTN3P15516 51 aa-8.21□□□□□ -3.72
PRPF40A-207ENST00000471701 GOLGB1Q14789 3259 aaKnown RBP-8.22□□□□□ -3.73
PRPF40A-207ENST00000471701 GCC2Q8IWJ2 1684 aa-8.44□□□□□ -3.76
PRPF40A-207ENST00000471701 SNRPGP62308 76 aaKnown RBP-8.67□□□□□ -3.8
PRPF40A-207ENST00000471701 RPL39P5Q59GN2 51 aa-8.74□□□□□ -3.81
PRPF40A-207ENST00000471701 Q9Y3F1 56 aa-8.77□□□□□ -3.81
PRPF40A-207ENST00000471701 DEFB108AA8MXU0 73 aa-8.88□□□□□ -3.83
PRPF40A-207ENST00000471701 H3BSH0 61 aa-8.98□□□□□ -3.85
PRPF40A-207ENST00000471701 COX14Q96I36 57 aa-9.3□□□□□ -3.9
PRPF40A-207ENST00000471701 DEFB108BQ8NET1 73 aa-9.59□□□□□ -3.94
PRPF40A-207ENST00000471701 STATHP02808 62 aa-10.65□□□□□ -4.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms