RNA–Protein interactions for RNA: ENST00000471693.1

SRRM1-209, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-209ENST00000471693 ABCA5Q8WWZ7 1642 aa-2.31□□□□□ -2.78
SRRM1-209ENST00000471693 TRPM2O94759 1503 aa-2.32□□□□□ -2.78
SRRM1-209ENST00000471693 SZT2Q5T011 3432 aa-2.32□□□□□ -2.78
SRRM1-209ENST00000471693 SCRIBQ14160 1630 aa-2.32□□□□□ -2.78
SRRM1-209ENST00000471693 CLTCL1P53675 1640 aa-2.35□□□□□ -2.78
SRRM1-209ENST00000471693 KRTAP19-6Q3LI70 58 aa-2.35□□□□□ -2.79
SRRM1-209ENST00000471693 PRXQ9BXM0 1461 aa-2.37□□□□□ -2.79
SRRM1-209ENST00000471693 NRXN3Q9Y4C0 1643 aa-2.37□□□□□ -2.79
SRRM1-209ENST00000471693 DDX60Q8IY21 1712 aaKnown RBP-2.37□□□□□ -2.79
SRRM1-209ENST00000471693 TTTY10Q9BZA0 68 aa-2.41□□□□□ -2.8
SRRM1-209ENST00000471693 CMC2Q9NRP2 79 aa-2.41□□□□□ -2.8
SRRM1-209ENST00000471693 NDUFA1O15239 70 aa-2.43□□□□□ -2.8
SRRM1-209ENST00000471693 ADCY10Q96PN6 1610 aa-2.43□□□□□ -2.8
SRRM1-209ENST00000471693 WDFY4Q6ZS81 3184 aa-2.44□□□□□ -2.8
SRRM1-209ENST00000471693 IQGAP1P46940 1657 aa-2.44□□□□□ -2.8
SRRM1-209ENST00000471693 RHPN1-AS1Q9BWJ2 59 aa-2.45□□□□□ -2.8
SRRM1-209ENST00000471693 ABCC8Q09428 1581 aa-2.45□□□□□ -2.8
SRRM1-209ENST00000471693 TOMM7Q9P0U1 55 aa-2.46□□□□□ -2.8
SRRM1-209ENST00000471693 EP400Q96L91 3159 aa-2.47□□□□□ -2.8
SRRM1-209ENST00000471693 LINC01590Q5TEZ4 76 aa-2.47□□□□□ -2.8
SRRM1-209ENST00000471693 NFAT5O94916 1531 aa-2.47□□□□□ -2.81
SRRM1-209ENST00000471693 CENPEQ02224 2701 aa-2.48□□□□□ -2.81
SRRM1-209ENST00000471693 FANCD2Q9BXW9 1451 aa-2.49□□□□□ -2.81
SRRM1-209ENST00000471693 DEFB133Q30KQ1 61 aa-2.49□□□□□ -2.81
SRRM1-209ENST00000471693 DCHS1Q96JQ0 3298 aa-2.51□□□□□ -2.81
SRRM1-209ENST00000471693 MUC3AQ02505 3323 aa-2.53□□□□□ -2.82
SRRM1-209ENST00000471693 CD52P31358 61 aa-2.58□□□□□ -2.82
SRRM1-209ENST00000471693 XIRP2A4UGR9 3374 aa-2.58□□□□□ -2.82
SRRM1-209ENST00000471693 HTN1P15515 57 aa-2.59□□□□□ -2.82
SRRM1-209ENST00000471693 DNAH14Q0VDD8 3507 aa-2.6□□□□□ -2.83
SRRM1-209ENST00000471693 USP34Q70CQ2 3546 aa-2.61□□□□□ -2.83
SRRM1-209ENST00000471693 A0A096LNI7 61 aa-2.62□□□□□ -2.83
SRRM1-209ENST00000471693 SMIM31A0A1B0GVY4 71 aa-2.63□□□□□ -2.83
SRRM1-209ENST00000471693 MKI67P46013 3256 aaKnown RBP-2.64□□□□□ -2.83
SRRM1-209ENST00000471693 DNAH12Q6ZR08 3092 aa-2.69□□□□□ -2.84
SRRM1-209ENST00000471693 UNC80Q8N2C7 3258 aa-2.72□□□□□ -2.84
SRRM1-209ENST00000471693 ERICH3Q5RHP9 1530 aa-2.73□□□□□ -2.85
SRRM1-209ENST00000471693 CFAP47Q6ZTR5 3102 aa-2.74□□□□□ -2.85
SRRM1-209ENST00000471693 LOC400499M0QZD8 3231 aa-2.76□□□□□ -2.85
SRRM1-209ENST00000471693 DUOX1Q9NRD9 1551 aa-2.76□□□□□ -2.85
SRRM1-209ENST00000471693 SAMD9LQ8IVG5 1584 aa-2.77□□□□□ -2.85
SRRM1-209ENST00000471693 RPL39P62891 51 aaKnown RBP-2.77□□□□□ -2.85
SRRM1-209ENST00000471693 DEFB124Q8NES8 71 aa-2.78□□□□□ -2.85
SRRM1-209ENST00000471693 SNRPGP15A8MWD9 76 aa-2.82□□□□□ -2.86
SRRM1-209ENST00000471693 ASPMQ8IZT6 3477 aa-2.82□□□□□ -2.86
SRRM1-209ENST00000471693 TOP2AP11388 1531 aaKnown RBP-2.87□□□□□ -2.87
SRRM1-209ENST00000471693 RPL39LQ96EH5 51 aaKnown RBP-2.89□□□□□ -2.87
SRRM1-209ENST00000471693 BRCA2P51587 3418 aa-2.91□□□□□ -2.87
SRRM1-209ENST00000471693 KRTAP19-2Q3LHN2 52 aa-2.91□□□□□ -2.88
SRRM1-209ENST00000471693 VCANP13611 3396 aa-2.92□□□□□ -2.88
SRRM1-209ENST00000471693 ATP7AQ04656 1500 aa-2.96□□□□□ -2.88
SRRM1-209ENST00000471693 MROH2BQ7Z745 1585 aa-2.97□□□□□ -2.89
SRRM1-209ENST00000471693 CENPFP49454 3210 aa-3□□□□□ -2.89
SRRM1-209ENST00000471693 IQGAP2Q13576 1575 aa-3□□□□□ -2.89
SRRM1-209ENST00000471693 TOMM5Q8N4H5 51 aa-3.01□□□□□ -2.89
SRRM1-209ENST00000471693 DEFB104AQ8WTQ1 72 aa-3.01□□□□□ -2.89
SRRM1-209ENST00000471693 H3BUX3 64 aa-3.02□□□□□ -2.89
SRRM1-209ENST00000471693 LINC01556Q5JQF7 62 aa-3.04□□□□□ -2.9
SRRM1-209ENST00000471693 CDH23Q9H251 3354 aa-3.07□□□□□ -2.9
SRRM1-209ENST00000471693 VPS13AQ96RL7 3174 aa-3.19□□□□□ -2.92
SRRM1-209ENST00000471693 K7EIM0 57 aa-3.25□□□□□ -2.93
SRRM1-209ENST00000471693 ARHGAP5-AS1Q96IT6 56 aa-3.33□□□□□ -2.94
SRRM1-209ENST00000471693 APELAP0DMC3 54 aa-3.37□□□□□ -2.95
SRRM1-209ENST00000471693 A0A096LPF7 62 aa-3.4□□□□□ -2.95
SRRM1-209ENST00000471693 PRCDQ00LT1 54 aa-3.4□□□□□ -2.95
SRRM1-209ENST00000471693 UTRNP46939 3433 aa-3.46□□□□□ -2.96
SRRM1-209ENST00000471693 TMEM167AQ8TBQ9 72 aa-3.47□□□□□ -2.96
SRRM1-209ENST00000471693 HTN3P15516 51 aa-3.6□□□□□ -2.99
SRRM1-209ENST00000471693 GCC2Q8IWJ2 1684 aa-3.61□□□□□ -2.99
SRRM1-209ENST00000471693 SNRPGP62308 76 aaKnown RBP-3.61□□□□□ -2.99
SRRM1-209ENST00000471693 Q9Y3F1 56 aa-3.7□□□□□ -3
SRRM1-209ENST00000471693 RPL39P5Q59GN2 51 aa-3.77□□□□□ -3.01
SRRM1-209ENST00000471693 DEFB108AA8MXU0 73 aa-3.83□□□□□ -3.02
SRRM1-209ENST00000471693 H3BSH0 61 aa-3.86□□□□□ -3.03
SRRM1-209ENST00000471693 GOLGB1Q14789 3259 aaKnown RBP-3.88□□□□□ -3.03
SRRM1-209ENST00000471693 COX14Q96I36 57 aa-4.03□□□□□ -3.05
SRRM1-209ENST00000471693 DEFB108BQ8NET1 73 aa-4.2□□□□□ -3.08
SRRM1-209ENST00000471693 STATHP02808 62 aa-4.82□□□□□ -3.18
Retrieved 78 of 20,778 RNA–protein pairs in 72.4 ms