RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
CHMP2B-203ENST00000471660 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
CHMP2B-203ENST00000471660 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.74
CHMP2B-203ENST00000471660 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
CHMP2B-203ENST00000471660 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
CHMP2B-203ENST00000471660 KMT2DO14686 5537 aa4.08□□□□□ -1.76
CHMP2B-203ENST00000471660 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
CHMP2B-203ENST00000471660 MT1BP07438 61 aa4.06□□□□□ -1.76
CHMP2B-203ENST00000471660 SPRR2EP22531 72 aa4□□□□□ -1.77
CHMP2B-203ENST00000471660 SPRR2BP35325 72 aa4□□□□□ -1.77
CHMP2B-203ENST00000471660 SPRR2AP35326 72 aa4□□□□□ -1.77
CHMP2B-203ENST00000471660 MT1XP80297 61 aa3.98□□□□□ -1.77
CHMP2B-203ENST00000471660 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
CHMP2B-203ENST00000471660 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
CHMP2B-203ENST00000471660 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
CHMP2B-203ENST00000471660 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
CHMP2B-203ENST00000471660 SPRR2DP22532 72 aa3.89□□□□□ -1.79
CHMP2B-203ENST00000471660 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
CHMP2B-203ENST00000471660 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
CHMP2B-203ENST00000471660 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
CHMP2B-203ENST00000471660 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
CHMP2B-203ENST00000471660 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
CHMP2B-203ENST00000471660 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
CHMP2B-203ENST00000471660 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
CHMP2B-203ENST00000471660 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
CHMP2B-203ENST00000471660 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
CHMP2B-203ENST00000471660 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
CHMP2B-203ENST00000471660 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
CHMP2B-203ENST00000471660 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
CHMP2B-203ENST00000471660 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
CHMP2B-203ENST00000471660 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CHMP2B-203ENST00000471660 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
CHMP2B-203ENST00000471660 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
CHMP2B-203ENST00000471660 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
CHMP2B-203ENST00000471660 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
CHMP2B-203ENST00000471660 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CHMP2B-203ENST00000471660 MT1EP04732 61 aa3.5□□□□□ -1.85
CHMP2B-203ENST00000471660 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
CHMP2B-203ENST00000471660 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
CHMP2B-203ENST00000471660 MT1LQ93083 61 aa3.47□□□□□ -1.85
CHMP2B-203ENST00000471660 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
CHMP2B-203ENST00000471660 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
CHMP2B-203ENST00000471660 MT4P47944 62 aa3.39□□□□□ -1.87
CHMP2B-203ENST00000471660 MT1GP13640 62 aa3.39□□□□□ -1.87
CHMP2B-203ENST00000471660 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
CHMP2B-203ENST00000471660 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
CHMP2B-203ENST00000471660 MT1MQ8N339 61 aa3.28□□□□□ -1.88
CHMP2B-203ENST00000471660 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
CHMP2B-203ENST00000471660 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
CHMP2B-203ENST00000471660 PRM1P04553 51 aa3.23□□□□□ -1.89
CHMP2B-203ENST00000471660 MT1AP04731 61 aa3.23□□□□□ -1.89
CHMP2B-203ENST00000471660 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
CHMP2B-203ENST00000471660 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CHMP2B-203ENST00000471660 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
CHMP2B-203ENST00000471660 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
CHMP2B-203ENST00000471660 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
CHMP2B-203ENST00000471660 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
CHMP2B-203ENST00000471660 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CHMP2B-203ENST00000471660 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
CHMP2B-203ENST00000471660 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
CHMP2B-203ENST00000471660 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CHMP2B-203ENST00000471660 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
CHMP2B-203ENST00000471660 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
CHMP2B-203ENST00000471660 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
CHMP2B-203ENST00000471660 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
CHMP2B-203ENST00000471660 MT3P25713 68 aa2.73□□□□□ -1.97
CHMP2B-203ENST00000471660 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
CHMP2B-203ENST00000471660 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
CHMP2B-203ENST00000471660 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
CHMP2B-203ENST00000471660 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CHMP2B-203ENST00000471660 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
CHMP2B-203ENST00000471660 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
CHMP2B-203ENST00000471660 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
CHMP2B-203ENST00000471660 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
CHMP2B-203ENST00000471660 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CHMP2B-203ENST00000471660 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CHMP2B-203ENST00000471660 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 30 ms