RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 ACYP1P07311 99 aa0.31□□□□□ -2.36
VPS13A-210ENST00000471439 LOC101927531A0A1B0GV80 90 aa0.3□□□□□ -2.36
VPS13A-210ENST00000471439 BVES-AS1Q5T3Y7 98 aa0.3□□□□□ -2.36
VPS13A-210ENST00000471439 BRK1Q8WUW1 75 aa0.3□□□□□ -2.36
VPS13A-210ENST00000471439 IFI27L1Q96BM0 104 aa0.3□□□□□ -2.36
VPS13A-210ENST00000471439 CYP4F30PQ9H0H9 118 aa0.3□□□□□ -2.36
VPS13A-210ENST00000471439 PLNP26678 52 aa0.29□□□□□ -2.36
VPS13A-210ENST00000471439 IGKCP01834 107 aa0.28□□□□□ -2.36
VPS13A-210ENST00000471439 COPS9Q8WXC6 57 aa0.26□□□□□ -2.37
VPS13A-210ENST00000471439 PMCHL2Q9BQD1 86 aa0.26□□□□□ -2.37
VPS13A-210ENST00000471439 SNCGO76070 127 aa0.25□□□□□ -2.37
VPS13A-210ENST00000471439 S100ZQ8WXG8 99 aa0.25□□□□□ -2.37
VPS13A-210ENST00000471439 KANTRA0A1W2PQU2 76 aa0.24□□□□□ -2.37
VPS13A-210ENST00000471439 DPM2O94777 84 aa0.24□□□□□ -2.37
VPS13A-210ENST00000471439 C18orf32Q8TCD1 76 aa0.23□□□□□ -2.37
VPS13A-210ENST00000471439 S100PP25815 95 aa0.22□□□□□ -2.37
VPS13A-210ENST00000471439 SEC11CQ9BY50 192 aa0.22□□□□□ -2.37
VPS13A-210ENST00000471439 UQCRQO14949 82 aa0.21□□□□□ -2.38
VPS13A-210ENST00000471439 HIGD1BQ9P298 99 aa0.21□□□□□ -2.38
VPS13A-210ENST00000471439 TRAV22A0A0B4J277 110 aa0.2□□□□□ -2.38
VPS13A-210ENST00000471439 H0YGX0 51 aa0.2□□□□□ -2.38
VPS13A-210ENST00000471439 MT-ND4LP03901 98 aa0.2□□□□□ -2.38
VPS13A-210ENST00000471439 NREPQ16612 68 aa0.19□□□□□ -2.38
VPS13A-210ENST00000471439 DMAC1Q96GE9 116 aa0.19□□□□□ -2.38
VPS13A-210ENST00000471439 A0A1B0GX51 115 aa0.18□□□□□ -2.38
VPS13A-210ENST00000471439 C9JAW5 83 aa0.17□□□□□ -2.38
VPS13A-210ENST00000471439 RPS28P62857 69 aaKnown RBP0.17□□□□□ -2.38
VPS13A-210ENST00000471439 TSTD3H0UI37 97 aa0.16□□□□□ -2.38
VPS13A-210ENST00000471439 LEPROTL1O95214 131 aa0.15□□□□□ -2.39
VPS13A-210ENST00000471439 TP53AIP1Q9HCN2 124 aa0.14□□□□□ -2.39
VPS13A-210ENST00000471439 CLLU1Q5K131 121 aa0.07□□□□□ -2.4
VPS13A-210ENST00000471439 ACYP2P14621 99 aa0.06□□□□□ -2.4
VPS13A-210ENST00000471439 KRTDAPP60985 99 aa0.06□□□□□ -2.4
VPS13A-210ENST00000471439 PEA15Q15121 130 aa0.06□□□□□ -2.4
VPS13A-210ENST00000471439 SYS1-DBNDD2H3BUS1 97 aa0.01□□□□□ -2.41
VPS13A-210ENST00000471439 LINC01545Q5VT33 79 aa0.01□□□□□ -2.41
VPS13A-210ENST00000471439 SCGB1A1P11684 91 aa0□□□□□ -2.41
VPS13A-210ENST00000471439 PRR15LQ9BU68 103 aa0□□□□□ -2.41
VPS13A-210ENST00000471439 SPTSSBQ8NFR3 76 aa-0.01□□□□□ -2.41
VPS13A-210ENST00000471439 H0Y9P7 68 aa-0.02□□□□□ -2.41
VPS13A-210ENST00000471439 SPCS1Q9Y6A9 102 aa-0.02□□□□□ -2.41
VPS13A-210ENST00000471439 ATOX1O00244 68 aa-0.04□□□□□ -2.42
VPS13A-210ENST00000471439 PRO1854Q9UHT4 67 aa-0.06□□□□□ -2.42
VPS13A-210ENST00000471439 CCDC179H3BU77 68 aa-0.07□□□□□ -2.42
VPS13A-210ENST00000471439 H7BZZ5 65 aa-0.08□□□□□ -2.42
VPS13A-210ENST00000471439 COX6CP09669 75 aa-0.1□□□□□ -2.43
VPS13A-210ENST00000471439 LOC105371267A0A1B0GV96 52 aa-0.13□□□□□ -2.43
VPS13A-210ENST00000471439 CHKB-CPT1BH3BT56 60 aa-0.13□□□□□ -2.43
VPS13A-210ENST00000471439 K7ERU9 68 aa-0.14□□□□□ -2.43
VPS13A-210ENST00000471439 J3QR89 54 aa-0.15□□□□□ -2.43
VPS13A-210ENST00000471439 SERP1Q9Y6X1 66 aa-0.18□□□□□ -2.44
VPS13A-210ENST00000471439 ATXN8Q156A1 80 aa-0.19□□□□□ -2.44
VPS13A-210ENST00000471439 TMEM218A2RU14 115 aa-0.21□□□□□ -2.44
VPS13A-210ENST00000471439 UBL5Q9BZL1 73 aa-0.21□□□□□ -2.44
VPS13A-210ENST00000471439 COX8AP10176 69 aa-0.25□□□□□ -2.45
VPS13A-210ENST00000471439 SERP2Q8N6R1 65 aa-0.25□□□□□ -2.45
VPS13A-210ENST00000471439 VAMP8Q9BV40 100 aa-0.26□□□□□ -2.45
VPS13A-210ENST00000471439 DLEU1O43261 78 aa-0.27□□□□□ -2.45
VPS13A-210ENST00000471439 C14orf144Q96I85 54 aa-0.3□□□□□ -2.46
VPS13A-210ENST00000471439 SMIM6P0DI80 62 aa-0.33□□□□□ -2.46
VPS13A-210ENST00000471439 PRM1P04553 51 aa-0.34□□□□□ -2.46
VPS13A-210ENST00000471439 APOC3P02656 99 aa-0.36□□□□□ -2.47
VPS13A-210ENST00000471439 HSD52Q0P140 79 aa-0.37□□□□□ -2.47
VPS13A-210ENST00000471439 SVBPQ8N300 66 aa-0.41□□□□□ -2.48
VPS13A-210ENST00000471439 A0A1B0GU69 56 aa-0.43□□□□□ -2.48
VPS13A-210ENST00000471439 UQCR11O14957 56 aa-0.52□□□□□ -2.49
VPS13A-210ENST00000471439 LINC01558Q9Y6Z2 57 aa-0.52□□□□□ -2.49
VPS13A-210ENST00000471439 ATP5EP2Q5VTU8 51 aa-0.54□□□□□ -2.5
VPS13A-210ENST00000471439 A0A1B0GV90 55 aa-0.66□□□□□ -2.52
VPS13A-210ENST00000471439 UQCR10Q9UDW1 63 aa-0.66□□□□□ -2.52
VPS13A-210ENST00000471439 S100A1P23297 94 aa-0.68□□□□□ -2.52
VPS13A-210ENST00000471439 M0R143 59 aa-0.7□□□□□ -2.52
VPS13A-210ENST00000471439 LINC00643Q86TS7 51 aa-0.71□□□□□ -2.52
VPS13A-210ENST00000471439 ETDBQ3ZM63 59 aa-0.72□□□□□ -2.52
VPS13A-210ENST00000471439 ATP5EP56381 51 aaPredicted RBP-0.75□□□□□ -2.53
VPS13A-210ENST00000471439 PYY3Q5JQD4 70 aa-0.81□□□□□ -2.54
VPS13A-210ENST00000471439 GTF2H5Q6ZYL4 71 aa-0.92□□□□□ -2.56
VPS13A-210ENST00000471439 COL5A1-AS1Q5SY13 56 aa-0.97□□□□□ -2.56
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms