RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 MT1LQ93083 61 aa4.85□□□□□ -1.63
ABCA4-204ENST00000470771 LCE3AQ5TA76 89 aa4.83□□□□□ -1.64
ABCA4-204ENST00000470771 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
ABCA4-204ENST00000470771 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
ABCA4-204ENST00000470771 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
ABCA4-204ENST00000470771 MT4P47944 62 aa4.76□□□□□ -1.65
ABCA4-204ENST00000470771 LINC01558Q9Y6Z2 57 aa4.75□□□□□ -1.65
ABCA4-204ENST00000470771 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
ABCA4-204ENST00000470771 UQCR11O14957 56 aa4.72□□□□□ -1.65
ABCA4-204ENST00000470771 Q1T7F1 81 aa4.7□□□□□ -1.66
ABCA4-204ENST00000470771 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
ABCA4-204ENST00000470771 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
ABCA4-204ENST00000470771 V9GYY9 64 aa4.69□□□□□ -1.66
ABCA4-204ENST00000470771 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
ABCA4-204ENST00000470771 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
ABCA4-204ENST00000470771 K7ERS5 55 aa4.61□□□□□ -1.67
ABCA4-204ENST00000470771 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
ABCA4-204ENST00000470771 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
ABCA4-204ENST00000470771 PSPHP1O15172 72 aa4.58□□□□□ -1.68
ABCA4-204ENST00000470771 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
ABCA4-204ENST00000470771 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
ABCA4-204ENST00000470771 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
ABCA4-204ENST00000470771 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
ABCA4-204ENST00000470771 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
ABCA4-204ENST00000470771 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
ABCA4-204ENST00000470771 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
ABCA4-204ENST00000470771 A6NED7 52 aa4.44□□□□□ -1.7
ABCA4-204ENST00000470771 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
ABCA4-204ENST00000470771 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
ABCA4-204ENST00000470771 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
ABCA4-204ENST00000470771 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
ABCA4-204ENST00000470771 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
ABCA4-204ENST00000470771 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
ABCA4-204ENST00000470771 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
ABCA4-204ENST00000470771 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
ABCA4-204ENST00000470771 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
ABCA4-204ENST00000470771 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
ABCA4-204ENST00000470771 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
ABCA4-204ENST00000470771 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.73
ABCA4-204ENST00000470771 ROMO1P60602 79 aa4.19□□□□□ -1.74
ABCA4-204ENST00000470771 MT1AP04731 61 aa4.13□□□□□ -1.75
ABCA4-204ENST00000470771 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
ABCA4-204ENST00000470771 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
ABCA4-204ENST00000470771 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
ABCA4-204ENST00000470771 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
ABCA4-204ENST00000470771 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
ABCA4-204ENST00000470771 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
ABCA4-204ENST00000470771 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
ABCA4-204ENST00000470771 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
ABCA4-204ENST00000470771 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
ABCA4-204ENST00000470771 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
ABCA4-204ENST00000470771 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
ABCA4-204ENST00000470771 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
ABCA4-204ENST00000470771 MT3P25713 68 aa3.84□□□□□ -1.79
ABCA4-204ENST00000470771 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
ABCA4-204ENST00000470771 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
ABCA4-204ENST00000470771 H3BS24 57 aa3.58□□□□□ -1.84
ABCA4-204ENST00000470771 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
ABCA4-204ENST00000470771 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
ABCA4-204ENST00000470771 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
ABCA4-204ENST00000470771 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
ABCA4-204ENST00000470771 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
ABCA4-204ENST00000470771 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
ABCA4-204ENST00000470771 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
ABCA4-204ENST00000470771 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
ABCA4-204ENST00000470771 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
ABCA4-204ENST00000470771 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
ABCA4-204ENST00000470771 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
ABCA4-204ENST00000470771 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
ABCA4-204ENST00000470771 INE1O15225 51 aa2.92□□□□□ -1.94
ABCA4-204ENST00000470771 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
ABCA4-204ENST00000470771 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
ABCA4-204ENST00000470771 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
ABCA4-204ENST00000470771 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
ABCA4-204ENST00000470771 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
ABCA4-204ENST00000470771 PRM1P04553 51 aa2.14□□□□□ -2.07
ABCA4-204ENST00000470771 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
ABCA4-204ENST00000470771 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms