RNA–Protein interactions for RNA: ENST00000470518.5

SGSM3-208, Transcript of small G protein signaling modulator 3, human

TSL 3

Gene SGSM3, Length 854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-208	ENST00000470518	LCE3B	Q5TA77	95 aa		5.29	□□□□□ -1.56
SGSM3-208	ENST00000470518	SPINT4	Q6UDR6	99 aa		5.29	□□□□□ -1.56
SGSM3-208	ENST00000470518	KRTAP15-1	Q3LI76	137 aa		5.25	□□□□□ -1.57
SGSM3-208	ENST00000470518	GPR98	Q8WXG9	6306 aa		5.23	□□□□□ -1.57
SGSM3-208	ENST00000470518	KRTAP13-4	Q3LI77	160 aa		5.21	□□□□□ -1.58
SGSM3-208	ENST00000470518	NDUFAF8	A1L188	74 aa		5.2	□□□□□ -1.58
SGSM3-208	ENST00000470518		A0A0D9SG42	100 aa		5.16	□□□□□ -1.58
SGSM3-208	ENST00000470518	DST	Q03001	7570 aa	Known RBP	5.15	□□□□□ -1.58
SGSM3-208	ENST00000470518	LUZP6	Q538Z0	58 aa		5.11	□□□□□ -1.59
SGSM3-208	ENST00000470518	KRTAP19-7	Q3SYF9	63 aa		5.09	□□□□□ -1.59
SGSM3-208	ENST00000470518	LCE5A	Q5TCM9	118 aa		5.08	□□□□□ -1.6
SGSM3-208	ENST00000470518	MT1E	P04732	61 aa		5.03	□□□□□ -1.6
SGSM3-208	ENST00000470518	KRTAP4-9	Q9BYQ8	210 aa		5.03	□□□□□ -1.6
SGSM3-208	ENST00000470518	KRTAP12-1	P59990	96 aa		5.01	□□□□□ -1.61
SGSM3-208	ENST00000470518	HMCN1	Q96RW7	5635 aa		5	□□□□□ -1.61
SGSM3-208	ENST00000470518	KRTAP19-3	Q7Z4W3	81 aa		4.99	□□□□□ -1.61
SGSM3-208	ENST00000470518	LCE1D	Q5T752	114 aa		4.91	□□□□□ -1.62
SGSM3-208	ENST00000470518	AHNAK2	Q8IVF2	5795 aa		4.9	□□□□□ -1.62
SGSM3-208	ENST00000470518	PP632	Q6XCG6	107 aa		4.9	□□□□□ -1.63
SGSM3-208	ENST00000470518	TNP1	P09430	55 aa		4.89	□□□□□ -1.63
SGSM3-208	ENST00000470518	MT1G	P13640	62 aa		4.88	□□□□□ -1.63
SGSM3-208	ENST00000470518	KRTAP19-5	Q3LI72	72 aa		4.88	□□□□□ -1.63
SGSM3-208	ENST00000470518	C10orf95	Q9H7T3	257 aa		4.85	□□□□□ -1.63
SGSM3-208	ENST00000470518	MT1M	Q8N339	61 aa		4.8	□□□□□ -1.64
SGSM3-208	ENST00000470518	MT4	P47944	62 aa		4.76	□□□□□ -1.65
SGSM3-208	ENST00000470518	LCE4A	Q5TA78	99 aa		4.76	□□□□□ -1.65
SGSM3-208	ENST00000470518	MT1L	Q93083	61 aa		4.76	□□□□□ -1.65
SGSM3-208	ENST00000470518	LCE3A	Q5TA76	89 aa		4.74	□□□□□ -1.65
SGSM3-208	ENST00000470518	KRTAP5-4	Q6L8H1	288 aa		4.74	□□□□□ -1.65
SGSM3-208	ENST00000470518	KRTAP4-3	Q9BYR4	195 aa		4.74	□□□□□ -1.65
SGSM3-208	ENST00000470518	KRTAP5-10	Q6L8G5	202 aa		4.71	□□□□□ -1.66
SGSM3-208	ENST00000470518	KRTAP4-6	Q9BYQ5	205 aa		4.68	□□□□□ -1.66
SGSM3-208	ENST00000470518	KRTAP12-3	P60328	96 aa		4.62	□□□□□ -1.67
SGSM3-208	ENST00000470518	KRTAP23-1	A1A580	65 aa		4.57	□□□□□ -1.68
SGSM3-208	ENST00000470518	KRTAP4-7	Q9BYR0	210 aa		4.55	□□□□□ -1.68
SGSM3-208	ENST00000470518	INE1	O15225	51 aa		4.53	□□□□□ -1.68
SGSM3-208	ENST00000470518	KRTAP5-7	Q6L8G8	165 aa		4.53	□□□□□ -1.68
SGSM3-208	ENST00000470518	KRTAP5-3	Q6L8H2	238 aa		4.51	□□□□□ -1.69
SGSM3-208	ENST00000470518	SPRR5	A0A1B0GTR4	108 aa		4.49	□□□□□ -1.69
SGSM3-208	ENST00000470518	KRTAP19-4	Q3LI73	84 aa		4.49	□□□□□ -1.69
SGSM3-208	ENST00000470518	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.49	□□□□□ -1.69
SGSM3-208	ENST00000470518	KRTAP20-2	Q3LI61	65 aa		4.47	□□□□□ -1.69
SGSM3-208	ENST00000470518	KRTAP12-4	P60329	112 aa		4.34	□□□□□ -1.71
SGSM3-208	ENST00000470518	SYNE1	Q8NF91	8797 aa	Known RBP	4.34	□□□□□ -1.71
SGSM3-208	ENST00000470518	LOC100996750	A0A140TA64	210 aa		4.32	□□□□□ -1.72
SGSM3-208	ENST00000470518	LCE3C	Q5T5A8	94 aa		4.25	□□□□□ -1.73
SGSM3-208	ENST00000470518	KRTAP5-2	Q701N4	177 aa		4.14	□□□□□ -1.75
SGSM3-208	ENST00000470518	KRTAP4-11	Q9BYQ6	195 aa		4.1	□□□□□ -1.75
SGSM3-208	ENST00000470518	MUC5AC	P98088	5654 aa		4.07	□□□□□ -1.76
SGSM3-208	ENST00000470518	AHNAK	Q09666	5890 aa	Known RBP	4.06	□□□□□ -1.76
SGSM3-208	ENST00000470518	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.06	□□□□□ -1.76
SGSM3-208	ENST00000470518	KRTAP6-1	Q3LI64	71 aa		4.05	□□□□□ -1.76
SGSM3-208	ENST00000470518	MT1A	P04731	61 aa		4.04	□□□□□ -1.76
SGSM3-208	ENST00000470518	KRTAP5-8	O75690	187 aa		4.03	□□□□□ -1.76
SGSM3-208	ENST00000470518	KRTAP9-6	A8MVA2	160 aa		3.94	□□□□□ -1.78
SGSM3-208	ENST00000470518	KRTAP9-4	Q9BYQ2	154 aa		3.94	□□□□□ -1.78
SGSM3-208	ENST00000470518	OBSCN	Q5VST9	7968 aa		3.92	□□□□□ -1.78
SGSM3-208	ENST00000470518	KRTAP6-2	Q3LI66	62 aa		3.89	□□□□□ -1.79
SGSM3-208	ENST00000470518	MT3	P25713	68 aa		3.77	□□□□□ -1.81
SGSM3-208	ENST00000470518	KRTAP5-1	Q6L8H4	278 aa		3.75	□□□□□ -1.81
SGSM3-208	ENST00000470518	KRTAP9-9	Q9BYP9	154 aa		3.72	□□□□□ -1.81
SGSM3-208	ENST00000470518	LCE1E	Q5T753	118 aa		3.45	□□□□□ -1.86
SGSM3-208	ENST00000470518	KRTAP4-2	Q9BYR5	136 aa		3.35	□□□□□ -1.87
SGSM3-208	ENST00000470518	LCE1B	Q5T7P3	118 aa		3.24	□□□□□ -1.89
SGSM3-208	ENST00000470518	LCE1C	Q5T751	118 aa		3.19	□□□□□ -1.9
SGSM3-208	ENST00000470518	LCE3D	Q9BYE3	92 aa		3.09	□□□□□ -1.91
SGSM3-208	ENST00000470518	KRTAP4-12	Q9BQ66	201 aa		3.06	□□□□□ -1.92
SGSM3-208	ENST00000470518	KRTAP5-11	Q6L8G4	156 aa		2.95	□□□□□ -1.94
SGSM3-208	ENST00000470518	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.92	□□□□□ -1.94
SGSM3-208	ENST00000470518	LCE3E	Q5T5B0	92 aa		2.91	□□□□□ -1.94
SGSM3-208	ENST00000470518	LCE1F	Q5T754	118 aa		2.85	□□□□□ -1.95
SGSM3-208	ENST00000470518	PRM1	P04553	51 aa		2.77	□□□□□ -1.97
SGSM3-208	ENST00000470518	KRTAP21-2	Q3LI59	83 aa		2.7	□□□□□ -1.98
SGSM3-208	ENST00000470518	PHGR1	C9JFL3	82 aa		2.68	□□□□□ -1.98
SGSM3-208	ENST00000470518	KRTAP4-4	Q9BYR3	166 aa		2.47	□□□□□ -2.01
SGSM3-208	ENST00000470518	MUC19	Q7Z5P9	8384 aa		2.43	□□□□□ -2.02
SGSM3-208	ENST00000470518	KRTAP21-1	Q3LI58	79 aa		2.02	□□□□□ -2.09
SGSM3-208	ENST00000470518	MUC16	Q8WXI7	14507 aa		1.66	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 97.3 ms