RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 BRK1Q8WUW1 75 aa2.95□□□□□ -1.94
VAMP3-202ENST00000470357 A0A0D9SG42 100 aa2.93□□□□□ -1.94
VAMP3-202ENST00000470357 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
VAMP3-202ENST00000470357 A8MU10 97 aa2.91□□□□□ -1.94
VAMP3-202ENST00000470357 MDN1Q9NU22 5596 aa2.9□□□□□ -1.94
VAMP3-202ENST00000470357 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.95
VAMP3-202ENST00000470357 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
VAMP3-202ENST00000470357 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
VAMP3-202ENST00000470357 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
VAMP3-202ENST00000470357 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
VAMP3-202ENST00000470357 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
VAMP3-202ENST00000470357 KMT2DO14686 5537 aa2.87□□□□□ -1.95
VAMP3-202ENST00000470357 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
VAMP3-202ENST00000470357 MT1BP07438 61 aa2.83□□□□□ -1.96
VAMP3-202ENST00000470357 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
VAMP3-202ENST00000470357 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
VAMP3-202ENST00000470357 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
VAMP3-202ENST00000470357 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
VAMP3-202ENST00000470357 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
VAMP3-202ENST00000470357 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
VAMP3-202ENST00000470357 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
VAMP3-202ENST00000470357 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
VAMP3-202ENST00000470357 ROMO1P60602 79 aa2.76□□□□□ -1.97
VAMP3-202ENST00000470357 TNP1P09430 55 aa2.72□□□□□ -1.97
VAMP3-202ENST00000470357 MT1XP80297 61 aa2.72□□□□□ -1.97
VAMP3-202ENST00000470357 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
VAMP3-202ENST00000470357 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
VAMP3-202ENST00000470357 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
VAMP3-202ENST00000470357 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
VAMP3-202ENST00000470357 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
VAMP3-202ENST00000470357 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
VAMP3-202ENST00000470357 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
VAMP3-202ENST00000470357 SPRR2EP22531 72 aa2.61□□□□□ -1.99
VAMP3-202ENST00000470357 SPRR2BP35325 72 aa2.61□□□□□ -1.99
VAMP3-202ENST00000470357 SPRR2AP35326 72 aa2.61□□□□□ -1.99
VAMP3-202ENST00000470357 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
VAMP3-202ENST00000470357 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
VAMP3-202ENST00000470357 SPRR2DP22532 72 aa2.53□□□□□ -2
VAMP3-202ENST00000470357 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
VAMP3-202ENST00000470357 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
VAMP3-202ENST00000470357 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
VAMP3-202ENST00000470357 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
VAMP3-202ENST00000470357 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
VAMP3-202ENST00000470357 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
VAMP3-202ENST00000470357 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
VAMP3-202ENST00000470357 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
VAMP3-202ENST00000470357 MT1EP04732 61 aa2.4□□□□□ -2.03
VAMP3-202ENST00000470357 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
VAMP3-202ENST00000470357 MT1LQ93083 61 aa2.35□□□□□ -2.03
VAMP3-202ENST00000470357 MT1GP13640 62 aa2.34□□□□□ -2.03
VAMP3-202ENST00000470357 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
VAMP3-202ENST00000470357 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
VAMP3-202ENST00000470357 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
VAMP3-202ENST00000470357 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
VAMP3-202ENST00000470357 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
VAMP3-202ENST00000470357 MT1MQ8N339 61 aa2.27□□□□□ -2.05
VAMP3-202ENST00000470357 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
VAMP3-202ENST00000470357 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
VAMP3-202ENST00000470357 MT4P47944 62 aa2.24□□□□□ -2.05
VAMP3-202ENST00000470357 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
VAMP3-202ENST00000470357 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
VAMP3-202ENST00000470357 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
VAMP3-202ENST00000470357 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
VAMP3-202ENST00000470357 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
VAMP3-202ENST00000470357 MT1AP04731 61 aa2.02□□□□□ -2.09
VAMP3-202ENST00000470357 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
VAMP3-202ENST00000470357 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
VAMP3-202ENST00000470357 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
VAMP3-202ENST00000470357 INE1O15225 51 aa1.91□□□□□ -2.1
VAMP3-202ENST00000470357 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
VAMP3-202ENST00000470357 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
VAMP3-202ENST00000470357 KRTAP6-2Q3LI66 62 aa1.82□□□□□ -2.12
VAMP3-202ENST00000470357 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
VAMP3-202ENST00000470357 PRM1P04553 51 aa1.41□□□□□ -2.18
VAMP3-202ENST00000470357 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
VAMP3-202ENST00000470357 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
VAMP3-202ENST00000470357 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 142 ms