RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
BRAF-202ENST00000469930 LCE1AQ5T7P2 110 aa7.57□□□□□ -1.2
BRAF-202ENST00000469930 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
BRAF-202ENST00000469930 SPRR2EP22531 72 aa7.52□□□□□ -1.21
BRAF-202ENST00000469930 SPRR2BP35325 72 aa7.52□□□□□ -1.21
BRAF-202ENST00000469930 SPRR2AP35326 72 aa7.52□□□□□ -1.21
BRAF-202ENST00000469930 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
BRAF-202ENST00000469930 KRTAP19-3Q7Z4W3 81 aa7.47□□□□□ -1.21
BRAF-202ENST00000469930 MT1LQ93083 61 aa7.43□□□□□ -1.22
BRAF-202ENST00000469930 LCE5AQ5TCM9 118 aa7.42□□□□□ -1.22
BRAF-202ENST00000469930 MT1GP13640 62 aa7.41□□□□□ -1.22
BRAF-202ENST00000469930 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
BRAF-202ENST00000469930 KRTAP2-2Q9BYT5 123 aa7.38□□□□□ -1.23
BRAF-202ENST00000469930 KRTAP2-1Q9BYU5 128 aa7.38□□□□□ -1.23
BRAF-202ENST00000469930 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
BRAF-202ENST00000469930 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
BRAF-202ENST00000469930 PRAC1Q96KF2 57 aa7.3□□□□□ -1.24
BRAF-202ENST00000469930 SPRR2DP22532 72 aa7.26□□□□□ -1.25
BRAF-202ENST00000469930 MT1MQ8N339 61 aa7.24□□□□□ -1.25
BRAF-202ENST00000469930 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
BRAF-202ENST00000469930 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
BRAF-202ENST00000469930 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
BRAF-202ENST00000469930 GPR98Q8WXG9 6306 aa7.03□□□□□ -1.28
BRAF-202ENST00000469930 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
BRAF-202ENST00000469930 DSTQ03001 7570 aaKnown RBP6.86□□□□□ -1.31
BRAF-202ENST00000469930 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
BRAF-202ENST00000469930 KRTAP4-9Q9BYQ8 210 aa6.72□□□□□ -1.33
BRAF-202ENST00000469930 H3BS24 57 aa6.68□□□□□ -1.34
BRAF-202ENST00000469930 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
BRAF-202ENST00000469930 KRTAP9-6A8MVA2 160 aa6.64□□□□□ -1.35
BRAF-202ENST00000469930 KRTAP5-5Q701N2 237 aaPredicted RBP6.62□□□□□ -1.35
BRAF-202ENST00000469930 KRTAP5-4Q6L8H1 288 aa6.57□□□□□ -1.36
BRAF-202ENST00000469930 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
BRAF-202ENST00000469930 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
BRAF-202ENST00000469930 MT1AP04731 61 aa6.36□□□□□ -1.39
BRAF-202ENST00000469930 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
BRAF-202ENST00000469930 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
BRAF-202ENST00000469930 MT4P47944 62 aa6.32□□□□□ -1.4
BRAF-202ENST00000469930 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
BRAF-202ENST00000469930 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
BRAF-202ENST00000469930 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
BRAF-202ENST00000469930 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
BRAF-202ENST00000469930 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
BRAF-202ENST00000469930 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
BRAF-202ENST00000469930 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
BRAF-202ENST00000469930 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
BRAF-202ENST00000469930 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
BRAF-202ENST00000469930 KRTAP4-12Q9BQ66 201 aa6.04□□□□□ -1.44
BRAF-202ENST00000469930 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
BRAF-202ENST00000469930 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
BRAF-202ENST00000469930 KRTAP4-2Q9BYR5 136 aa5.83□□□□□ -1.48
BRAF-202ENST00000469930 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
BRAF-202ENST00000469930 MT3P25713 68 aa5.79□□□□□ -1.48
BRAF-202ENST00000469930 NDUFAF8A1L188 74 aa5.55□□□□□ -1.52
BRAF-202ENST00000469930 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
BRAF-202ENST00000469930 AHNAKQ09666 5890 aaKnown RBP5.37□□□□□ -1.55
BRAF-202ENST00000469930 MUC5ACP98088 5654 aa5.34□□□□□ -1.55
BRAF-202ENST00000469930 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
BRAF-202ENST00000469930 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
BRAF-202ENST00000469930 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
BRAF-202ENST00000469930 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
BRAF-202ENST00000469930 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
BRAF-202ENST00000469930 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
BRAF-202ENST00000469930 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
BRAF-202ENST00000469930 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
BRAF-202ENST00000469930 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
BRAF-202ENST00000469930 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
BRAF-202ENST00000469930 INE1O15225 51 aa4.69□□□□□ -1.66
BRAF-202ENST00000469930 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
BRAF-202ENST00000469930 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
BRAF-202ENST00000469930 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
BRAF-202ENST00000469930 PRM1P04553 51 aa4.13□□□□□ -1.75
BRAF-202ENST00000469930 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
BRAF-202ENST00000469930 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
BRAF-202ENST00000469930 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
BRAF-202ENST00000469930 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
BRAF-202ENST00000469930 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
BRAF-202ENST00000469930 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 98 ms