RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
SSBP1-208ENST00000469123 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
SSBP1-208ENST00000469123 A0A0D9SG42 100 aa3.48□□□□□ -1.85
SSBP1-208ENST00000469123 INE1O15225 51 aa3.47□□□□□ -1.85
SSBP1-208ENST00000469123 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
SSBP1-208ENST00000469123 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
SSBP1-208ENST00000469123 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
SSBP1-208ENST00000469123 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
SSBP1-208ENST00000469123 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
SSBP1-208ENST00000469123 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
SSBP1-208ENST00000469123 KMT2DO14686 5537 aa3.35□□□□□ -1.87
SSBP1-208ENST00000469123 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
SSBP1-208ENST00000469123 NEBP20929 6669 aa3.31□□□□□ -1.88
SSBP1-208ENST00000469123 TNP1P09430 55 aa3.29□□□□□ -1.88
SSBP1-208ENST00000469123 SPRR2EP22531 72 aa3.28□□□□□ -1.88
SSBP1-208ENST00000469123 SPRR2BP35325 72 aa3.28□□□□□ -1.88
SSBP1-208ENST00000469123 SPRR2AP35326 72 aa3.28□□□□□ -1.88
SSBP1-208ENST00000469123 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
SSBP1-208ENST00000469123 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
SSBP1-208ENST00000469123 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
SSBP1-208ENST00000469123 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
SSBP1-208ENST00000469123 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
SSBP1-208ENST00000469123 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
SSBP1-208ENST00000469123 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
SSBP1-208ENST00000469123 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
SSBP1-208ENST00000469123 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
SSBP1-208ENST00000469123 MT1EP04732 61 aa3.17□□□□□ -1.9
SSBP1-208ENST00000469123 SPRR2DP22532 72 aa3.17□□□□□ -1.9
SSBP1-208ENST00000469123 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
SSBP1-208ENST00000469123 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
SSBP1-208ENST00000469123 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
SSBP1-208ENST00000469123 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
SSBP1-208ENST00000469123 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
SSBP1-208ENST00000469123 MT1GP13640 62 aa3.09□□□□□ -1.91
SSBP1-208ENST00000469123 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
SSBP1-208ENST00000469123 MT1LQ93083 61 aa3.06□□□□□ -1.92
SSBP1-208ENST00000469123 MT1MQ8N339 61 aa3□□□□□ -1.93
SSBP1-208ENST00000469123 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
SSBP1-208ENST00000469123 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
SSBP1-208ENST00000469123 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
SSBP1-208ENST00000469123 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
SSBP1-208ENST00000469123 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
SSBP1-208ENST00000469123 MT4P47944 62 aa2.73□□□□□ -1.97
SSBP1-208ENST00000469123 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
SSBP1-208ENST00000469123 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
SSBP1-208ENST00000469123 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
SSBP1-208ENST00000469123 MT1AP04731 61 aa2.62□□□□□ -1.99
SSBP1-208ENST00000469123 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
SSBP1-208ENST00000469123 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
SSBP1-208ENST00000469123 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
SSBP1-208ENST00000469123 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
SSBP1-208ENST00000469123 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
SSBP1-208ENST00000469123 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
SSBP1-208ENST00000469123 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
SSBP1-208ENST00000469123 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SSBP1-208ENST00000469123 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
SSBP1-208ENST00000469123 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
SSBP1-208ENST00000469123 MT3P25713 68 aa2.41□□□□□ -2.02
SSBP1-208ENST00000469123 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
SSBP1-208ENST00000469123 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
SSBP1-208ENST00000469123 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
SSBP1-208ENST00000469123 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
SSBP1-208ENST00000469123 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
SSBP1-208ENST00000469123 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SSBP1-208ENST00000469123 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
SSBP1-208ENST00000469123 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SSBP1-208ENST00000469123 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
SSBP1-208ENST00000469123 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
SSBP1-208ENST00000469123 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
SSBP1-208ENST00000469123 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
SSBP1-208ENST00000469123 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
SSBP1-208ENST00000469123 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
SSBP1-208ENST00000469123 PRM1P04553 51 aa1.89□□□□□ -2.11
SSBP1-208ENST00000469123 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SSBP1-208ENST00000469123 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
SSBP1-208ENST00000469123 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
SSBP1-208ENST00000469123 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
SSBP1-208ENST00000469123 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 73.9 ms