RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 K7ERS5 55 aa4.29□□□□□ -1.72
TRAIP-202ENST00000469027 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
TRAIP-202ENST00000469027 A0A0D9SG42 100 aa4.27□□□□□ -1.73
TRAIP-202ENST00000469027 R4GN34 69 aa4.23□□□□□ -1.73
TRAIP-202ENST00000469027 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
TRAIP-202ENST00000469027 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
TRAIP-202ENST00000469027 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
TRAIP-202ENST00000469027 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
TRAIP-202ENST00000469027 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
TRAIP-202ENST00000469027 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
TRAIP-202ENST00000469027 ROMO1P60602 79 aa4.15□□□□□ -1.75
TRAIP-202ENST00000469027 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
TRAIP-202ENST00000469027 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.75
TRAIP-202ENST00000469027 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
TRAIP-202ENST00000469027 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
TRAIP-202ENST00000469027 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
TRAIP-202ENST00000469027 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
TRAIP-202ENST00000469027 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
TRAIP-202ENST00000469027 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
TRAIP-202ENST00000469027 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
TRAIP-202ENST00000469027 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
TRAIP-202ENST00000469027 MT1EP04732 61 aa3.92□□□□□ -1.78
TRAIP-202ENST00000469027 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
TRAIP-202ENST00000469027 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
TRAIP-202ENST00000469027 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
TRAIP-202ENST00000469027 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
TRAIP-202ENST00000469027 MT1GP13640 62 aa3.86□□□□□ -1.79
TRAIP-202ENST00000469027 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
TRAIP-202ENST00000469027 TNP1P09430 55 aa3.82□□□□□ -1.8
TRAIP-202ENST00000469027 MT1MQ8N339 61 aa3.8□□□□□ -1.8
TRAIP-202ENST00000469027 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
TRAIP-202ENST00000469027 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
TRAIP-202ENST00000469027 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
TRAIP-202ENST00000469027 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
TRAIP-202ENST00000469027 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
TRAIP-202ENST00000469027 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
TRAIP-202ENST00000469027 H3BS24 57 aa3.66□□□□□ -1.82
TRAIP-202ENST00000469027 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
TRAIP-202ENST00000469027 MT1LQ93083 61 aa3.63□□□□□ -1.83
TRAIP-202ENST00000469027 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
TRAIP-202ENST00000469027 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
TRAIP-202ENST00000469027 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
TRAIP-202ENST00000469027 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
TRAIP-202ENST00000469027 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
TRAIP-202ENST00000469027 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
TRAIP-202ENST00000469027 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
TRAIP-202ENST00000469027 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
TRAIP-202ENST00000469027 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
TRAIP-202ENST00000469027 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
TRAIP-202ENST00000469027 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
TRAIP-202ENST00000469027 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
TRAIP-202ENST00000469027 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
TRAIP-202ENST00000469027 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
TRAIP-202ENST00000469027 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
TRAIP-202ENST00000469027 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
TRAIP-202ENST00000469027 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
TRAIP-202ENST00000469027 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
TRAIP-202ENST00000469027 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
TRAIP-202ENST00000469027 MT1AP04731 61 aa3.07□□□□□ -1.92
TRAIP-202ENST00000469027 INE1O15225 51 aa2.86□□□□□ -1.95
TRAIP-202ENST00000469027 MT3P25713 68 aa2.86□□□□□ -1.95
TRAIP-202ENST00000469027 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
TRAIP-202ENST00000469027 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
TRAIP-202ENST00000469027 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
TRAIP-202ENST00000469027 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
TRAIP-202ENST00000469027 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
TRAIP-202ENST00000469027 LCE1CQ5T751 118 aa2.57□□□□□ -2
TRAIP-202ENST00000469027 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
TRAIP-202ENST00000469027 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
TRAIP-202ENST00000469027 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
TRAIP-202ENST00000469027 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
TRAIP-202ENST00000469027 PRM1P04553 51 aa2.18□□□□□ -2.06
TRAIP-202ENST00000469027 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
TRAIP-202ENST00000469027 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
TRAIP-202ENST00000469027 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
TRAIP-202ENST00000469027 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
TRAIP-202ENST00000469027 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 171.6 ms