RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 TMEM258P61165 79 aa4.94□□□□□ -1.62
CLRN1-204ENST00000468836 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
CLRN1-204ENST00000468836 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
CLRN1-204ENST00000468836 MT1EP04732 61 aa4.83□□□□□ -1.64
CLRN1-204ENST00000468836 UQCR11O14957 56 aa4.82□□□□□ -1.64
CLRN1-204ENST00000468836 TNP1P09430 55 aa4.82□□□□□ -1.64
CLRN1-204ENST00000468836 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
CLRN1-204ENST00000468836 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
CLRN1-204ENST00000468836 PCP4P48539 62 aa4.76□□□□□ -1.65
CLRN1-204ENST00000468836 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
CLRN1-204ENST00000468836 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
CLRN1-204ENST00000468836 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
CLRN1-204ENST00000468836 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
CLRN1-204ENST00000468836 V9GYY9 64 aa4.71□□□□□ -1.66
CLRN1-204ENST00000468836 K7ERS5 55 aa4.7□□□□□ -1.66
CLRN1-204ENST00000468836 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
CLRN1-204ENST00000468836 MT1GP13640 62 aa4.69□□□□□ -1.66
CLRN1-204ENST00000468836 PSPHP1O15172 72 aa4.64□□□□□ -1.67
CLRN1-204ENST00000468836 MT1LQ93083 61 aa4.62□□□□□ -1.67
CLRN1-204ENST00000468836 Q1T7F1 81 aa4.59□□□□□ -1.67
CLRN1-204ENST00000468836 MT1MQ8N339 61 aa4.59□□□□□ -1.67
CLRN1-204ENST00000468836 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
CLRN1-204ENST00000468836 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
CLRN1-204ENST00000468836 A6NED7 52 aa4.53□□□□□ -1.68
CLRN1-204ENST00000468836 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
CLRN1-204ENST00000468836 AHNAK2Q8IVF2 5795 aa4.5□□□□□ -1.69
CLRN1-204ENST00000468836 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
CLRN1-204ENST00000468836 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
CLRN1-204ENST00000468836 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
CLRN1-204ENST00000468836 MT4P47944 62 aa4.4□□□□□ -1.71
CLRN1-204ENST00000468836 RPS28P62857 69 aaKnown RBP4.39□□□□□ -1.71
CLRN1-204ENST00000468836 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
CLRN1-204ENST00000468836 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
CLRN1-204ENST00000468836 ROMO1P60602 79 aa4.31□□□□□ -1.72
CLRN1-204ENST00000468836 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
CLRN1-204ENST00000468836 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
CLRN1-204ENST00000468836 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
CLRN1-204ENST00000468836 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
CLRN1-204ENST00000468836 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
CLRN1-204ENST00000468836 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
CLRN1-204ENST00000468836 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
CLRN1-204ENST00000468836 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
CLRN1-204ENST00000468836 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
CLRN1-204ENST00000468836 MT1AP04731 61 aa3.95□□□□□ -1.78
CLRN1-204ENST00000468836 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
CLRN1-204ENST00000468836 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
CLRN1-204ENST00000468836 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
CLRN1-204ENST00000468836 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
CLRN1-204ENST00000468836 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
CLRN1-204ENST00000468836 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
CLRN1-204ENST00000468836 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
CLRN1-204ENST00000468836 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
CLRN1-204ENST00000468836 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
CLRN1-204ENST00000468836 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
CLRN1-204ENST00000468836 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
CLRN1-204ENST00000468836 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
CLRN1-204ENST00000468836 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
CLRN1-204ENST00000468836 MT3P25713 68 aa3.64□□□□□ -1.83
CLRN1-204ENST00000468836 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
CLRN1-204ENST00000468836 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
CLRN1-204ENST00000468836 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
CLRN1-204ENST00000468836 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
CLRN1-204ENST00000468836 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
CLRN1-204ENST00000468836 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
CLRN1-204ENST00000468836 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CLRN1-204ENST00000468836 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
CLRN1-204ENST00000468836 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
CLRN1-204ENST00000468836 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
CLRN1-204ENST00000468836 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
CLRN1-204ENST00000468836 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
CLRN1-204ENST00000468836 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CLRN1-204ENST00000468836 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
CLRN1-204ENST00000468836 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
CLRN1-204ENST00000468836 INE1O15225 51 aa2.52□□□□□ -2.01
CLRN1-204ENST00000468836 PRM1P04553 51 aa2.2□□□□□ -2.06
CLRN1-204ENST00000468836 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
CLRN1-204ENST00000468836 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
CLRN1-204ENST00000468836 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 67.4 ms