RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
COMMD3-206ENST00000468179 PRR15LQ9BU68 103 aa5.56□□□□□ -1.52
COMMD3-206ENST00000468179 A8MU10 97 aa5.47□□□□□ -1.53
COMMD3-206ENST00000468179 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
COMMD3-206ENST00000468179 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.45□□□□□ -1.54
COMMD3-206ENST00000468179 TMEM258P61165 79 aa5.44□□□□□ -1.54
COMMD3-206ENST00000468179 KRTAP5-11Q6L8G4 156 aa5.44□□□□□ -1.54
COMMD3-206ENST00000468179 LINC01558Q9Y6Z2 57 aa5.44□□□□□ -1.54
COMMD3-206ENST00000468179 MT1EP04732 61 aa5.43□□□□□ -1.54
COMMD3-206ENST00000468179 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.55
COMMD3-206ENST00000468179 TNP1P09430 55 aa5.38□□□□□ -1.55
COMMD3-206ENST00000468179 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
COMMD3-206ENST00000468179 UQCR11O14957 56 aa5.34□□□□□ -1.55
COMMD3-206ENST00000468179 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
COMMD3-206ENST00000468179 MT1GP13640 62 aa5.3□□□□□ -1.56
COMMD3-206ENST00000468179 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
COMMD3-206ENST00000468179 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
COMMD3-206ENST00000468179 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
COMMD3-206ENST00000468179 MT3P25713 68 aa5.23□□□□□ -1.57
COMMD3-206ENST00000468179 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
COMMD3-206ENST00000468179 V9GYY9 64 aa5.21□□□□□ -1.58
COMMD3-206ENST00000468179 MT1LQ93083 61 aa5.2□□□□□ -1.58
COMMD3-206ENST00000468179 K7ERS5 55 aa5.19□□□□□ -1.58
COMMD3-206ENST00000468179 MT1MQ8N339 61 aa5.16□□□□□ -1.58
COMMD3-206ENST00000468179 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.59
COMMD3-206ENST00000468179 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
COMMD3-206ENST00000468179 Q1T7F1 81 aa5.11□□□□□ -1.59
COMMD3-206ENST00000468179 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
COMMD3-206ENST00000468179 PSPHP1O15172 72 aa5.09□□□□□ -1.59
COMMD3-206ENST00000468179 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
COMMD3-206ENST00000468179 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
COMMD3-206ENST00000468179 A6NED7 52 aa4.97□□□□□ -1.61
COMMD3-206ENST00000468179 MT4P47944 62 aa4.93□□□□□ -1.62
COMMD3-206ENST00000468179 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
COMMD3-206ENST00000468179 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
COMMD3-206ENST00000468179 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
COMMD3-206ENST00000468179 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
COMMD3-206ENST00000468179 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
COMMD3-206ENST00000468179 ROMO1P60602 79 aa4.76□□□□□ -1.65
COMMD3-206ENST00000468179 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
COMMD3-206ENST00000468179 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
COMMD3-206ENST00000468179 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
COMMD3-206ENST00000468179 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
COMMD3-206ENST00000468179 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
COMMD3-206ENST00000468179 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
COMMD3-206ENST00000468179 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
COMMD3-206ENST00000468179 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
COMMD3-206ENST00000468179 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
COMMD3-206ENST00000468179 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
COMMD3-206ENST00000468179 AHNAK2Q8IVF2 5795 aa4.56□□□□□ -1.68
COMMD3-206ENST00000468179 KRTAP4-4Q9BYR3 166 aa4.53□□□□□ -1.68
COMMD3-206ENST00000468179 MT1AP04731 61 aa4.44□□□□□ -1.7
COMMD3-206ENST00000468179 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
COMMD3-206ENST00000468179 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
COMMD3-206ENST00000468179 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
COMMD3-206ENST00000468179 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
COMMD3-206ENST00000468179 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
COMMD3-206ENST00000468179 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
COMMD3-206ENST00000468179 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
COMMD3-206ENST00000468179 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
COMMD3-206ENST00000468179 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
COMMD3-206ENST00000468179 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.77
COMMD3-206ENST00000468179 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
COMMD3-206ENST00000468179 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
COMMD3-206ENST00000468179 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
COMMD3-206ENST00000468179 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
COMMD3-206ENST00000468179 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
COMMD3-206ENST00000468179 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
COMMD3-206ENST00000468179 LCE1CQ5T751 118 aa3.46□□□□□ -1.85
COMMD3-206ENST00000468179 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
COMMD3-206ENST00000468179 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
COMMD3-206ENST00000468179 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
COMMD3-206ENST00000468179 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
COMMD3-206ENST00000468179 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
COMMD3-206ENST00000468179 PRM1P04553 51 aa2.4□□□□□ -2.03
COMMD3-206ENST00000468179 INE1O15225 51 aa2.16□□□□□ -2.06
COMMD3-206ENST00000468179 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
COMMD3-206ENST00000468179 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 66.7 ms