RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
MSH5-213ENST00000468136 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
MSH5-213ENST00000468136 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
MSH5-213ENST00000468136 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
MSH5-213ENST00000468136 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
MSH5-213ENST00000468136 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
MSH5-213ENST00000468136 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
MSH5-213ENST00000468136 MT1EP04732 61 aa3.68□□□□□ -1.82
MSH5-213ENST00000468136 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
MSH5-213ENST00000468136 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
MSH5-213ENST00000468136 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
MSH5-213ENST00000468136 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
MSH5-213ENST00000468136 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
MSH5-213ENST00000468136 MT1LQ93083 61 aa3.61□□□□□ -1.83
MSH5-213ENST00000468136 KMT2DO14686 5537 aa3.59□□□□□ -1.83
MSH5-213ENST00000468136 MT1GP13640 62 aa3.56□□□□□ -1.84
MSH5-213ENST00000468136 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
MSH5-213ENST00000468136 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
MSH5-213ENST00000468136 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
MSH5-213ENST00000468136 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
MSH5-213ENST00000468136 MT1MQ8N339 61 aa3.45□□□□□ -1.86
MSH5-213ENST00000468136 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
MSH5-213ENST00000468136 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
MSH5-213ENST00000468136 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
MSH5-213ENST00000468136 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
MSH5-213ENST00000468136 SPRR2EP22531 72 aa3.31□□□□□ -1.88
MSH5-213ENST00000468136 SPRR2BP35325 72 aa3.31□□□□□ -1.88
MSH5-213ENST00000468136 SPRR2AP35326 72 aa3.31□□□□□ -1.88
MSH5-213ENST00000468136 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
MSH5-213ENST00000468136 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
MSH5-213ENST00000468136 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
MSH5-213ENST00000468136 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
MSH5-213ENST00000468136 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
MSH5-213ENST00000468136 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
MSH5-213ENST00000468136 SPRR2DP22532 72 aa3.2□□□□□ -1.9
MSH5-213ENST00000468136 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
MSH5-213ENST00000468136 INE1O15225 51 aa3.16□□□□□ -1.9
MSH5-213ENST00000468136 MT1AP04731 61 aa3.11□□□□□ -1.91
MSH5-213ENST00000468136 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
MSH5-213ENST00000468136 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
MSH5-213ENST00000468136 NEBP20929 6669 aa3.06□□□□□ -1.92
MSH5-213ENST00000468136 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
MSH5-213ENST00000468136 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
MSH5-213ENST00000468136 MT3P25713 68 aa2.99□□□□□ -1.93
MSH5-213ENST00000468136 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
MSH5-213ENST00000468136 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
MSH5-213ENST00000468136 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
MSH5-213ENST00000468136 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
MSH5-213ENST00000468136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
MSH5-213ENST00000468136 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
MSH5-213ENST00000468136 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
MSH5-213ENST00000468136 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
MSH5-213ENST00000468136 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
MSH5-213ENST00000468136 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
MSH5-213ENST00000468136 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
MSH5-213ENST00000468136 MT4P47944 62 aa2.71□□□□□ -1.98
MSH5-213ENST00000468136 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
MSH5-213ENST00000468136 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
MSH5-213ENST00000468136 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
MSH5-213ENST00000468136 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
MSH5-213ENST00000468136 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
MSH5-213ENST00000468136 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
MSH5-213ENST00000468136 PRM1P04553 51 aa2.35□□□□□ -2.03
MSH5-213ENST00000468136 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
MSH5-213ENST00000468136 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
MSH5-213ENST00000468136 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
MSH5-213ENST00000468136 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
MSH5-213ENST00000468136 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
MSH5-213ENST00000468136 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
MSH5-213ENST00000468136 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
MSH5-213ENST00000468136 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
MSH5-213ENST00000468136 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
MSH5-213ENST00000468136 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
MSH5-213ENST00000468136 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
MSH5-213ENST00000468136 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
MSH5-213ENST00000468136 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
MSH5-213ENST00000468136 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
MSH5-213ENST00000468136 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 66.9 ms