RNA–Protein interactions for RNA: ENST00000467915.1

SGSM3-206, Transcript of small G protein signaling modulator 3, human

TSL 3

Gene SGSM3, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-206	ENST00000467915	KRTAP19-3	Q7Z4W3	81 aa		5.87	□□□□□ -1.47
SGSM3-206	ENST00000467915	CDC42SE1	Q9NRR8	79 aa		5.83	□□□□□ -1.48
SGSM3-206	ENST00000467915	KRTAP19-5	Q3LI72	72 aa		5.74	□□□□□ -1.49
SGSM3-206	ENST00000467915	LCE1D	Q5T752	114 aa		5.72	□□□□□ -1.49
SGSM3-206	ENST00000467915	C10orf95	Q9H7T3	257 aa		5.72	□□□□□ -1.49
SGSM3-206	ENST00000467915	MT1G	P13640	62 aa		5.69	□□□□□ -1.5
SGSM3-206	ENST00000467915	BRK1	Q8WUW1	75 aa		5.68	□□□□□ -1.5
SGSM3-206	ENST00000467915	HMCN1	Q96RW7	5635 aa		5.66	□□□□□ -1.5
SGSM3-206	ENST00000467915	TNP1	P09430	55 aa		5.66	□□□□□ -1.5
SGSM3-206	ENST00000467915	MT4	P47944	62 aa		5.63	□□□□□ -1.51
SGSM3-206	ENST00000467915	MT1M	Q8N339	61 aa		5.63	□□□□□ -1.51
SGSM3-206	ENST00000467915	MT1L	Q93083	61 aa		5.6	□□□□□ -1.51
SGSM3-206	ENST00000467915	LCE4A	Q5TA78	99 aa		5.59	□□□□□ -1.51
SGSM3-206	ENST00000467915	PP632	Q6XCG6	107 aa		5.59	□□□□□ -1.51
SGSM3-206	ENST00000467915	KRTAP4-3	Q9BYR4	195 aa		5.58	□□□□□ -1.52
SGSM3-206	ENST00000467915	AHNAK2	Q8IVF2	5795 aa		5.55	□□□□□ -1.52
SGSM3-206	ENST00000467915	ROMO1	P60602	79 aa		5.54	□□□□□ -1.52
SGSM3-206	ENST00000467915	KRTAP25-1	Q3LHN0	102 aa		5.54	□□□□□ -1.52
SGSM3-206	ENST00000467915	LCE3A	Q5TA76	89 aa		5.49	□□□□□ -1.53
SGSM3-206	ENST00000467915	KRTAP5-4	Q6L8H1	288 aa		5.49	□□□□□ -1.53
SGSM3-206	ENST00000467915	KRTAP4-6	Q9BYQ5	205 aa		5.47	□□□□□ -1.53
SGSM3-206	ENST00000467915	KRTAP5-10	Q6L8G5	202 aa		5.43	□□□□□ -1.54
SGSM3-206	ENST00000467915	PMAIP1	Q13794	54 aa		5.39	□□□□□ -1.55
SGSM3-206	ENST00000467915	KRTAP4-7	Q9BYR0	210 aa		5.38	□□□□□ -1.55
SGSM3-206	ENST00000467915	PRO0628	Q9UI54	55 aa		5.34	□□□□□ -1.55
SGSM3-206	ENST00000467915	KRTAP23-1	A1A580	65 aa		5.33	□□□□□ -1.56
SGSM3-206	ENST00000467915	KRTAP12-3	P60328	96 aa		5.25	□□□□□ -1.57
SGSM3-206	ENST00000467915	KRTAP5-3	Q6L8H2	238 aa		5.24	□□□□□ -1.57
SGSM3-206	ENST00000467915	KRTAP5-7	Q6L8G8	165 aa		5.22	□□□□□ -1.57
SGSM3-206	ENST00000467915	KRTAP20-2	Q3LI61	65 aa		5.2	□□□□□ -1.58
SGSM3-206	ENST00000467915	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.19	□□□□□ -1.58
SGSM3-206	ENST00000467915	SYNE1	Q8NF91	8797 aa	Known RBP	5.13	□□□□□ -1.59
SGSM3-206	ENST00000467915	LOC100996750	A0A140TA64	210 aa		5.11	□□□□□ -1.59
SGSM3-206	ENST00000467915	SPRR5	A0A1B0GTR4	108 aa		5.1	□□□□□ -1.59
SGSM3-206	ENST00000467915	KRTAP15-1	Q3LI76	137 aa		5.06	□□□□□ -1.6
SGSM3-206	ENST00000467915	KRTAP12-4	P60329	112 aa		5.05	□□□□□ -1.6
SGSM3-206	ENST00000467915	PRAC1	Q96KF2	57 aa		5.04	□□□□□ -1.6
SGSM3-206	ENST00000467915	KTN1-AS1	Q86SY8	53 aa		4.99	□□□□□ -1.61
SGSM3-206	ENST00000467915	KRTAP19-4	Q3LI73	84 aa		4.97	□□□□□ -1.61
SGSM3-206	ENST00000467915	LCE3C	Q5T5A8	94 aa		4.87	□□□□□ -1.63
SGSM3-206	ENST00000467915	KRTAP4-11	Q9BYQ6	195 aa		4.81	□□□□□ -1.64
SGSM3-206	ENST00000467915	SVIP	Q8NHG7	77 aa		4.79	□□□□□ -1.64
SGSM3-206	ENST00000467915	KRTAP5-2	Q701N4	177 aa		4.78	□□□□□ -1.64
SGSM3-206	ENST00000467915	KRTAP6-1	Q3LI64	71 aa		4.77	□□□□□ -1.65
SGSM3-206	ENST00000467915	MT1A	P04731	61 aa		4.73	□□□□□ -1.65
SGSM3-206	ENST00000467915	OBSCN	Q5VST9	7968 aa		4.68	□□□□□ -1.66
SGSM3-206	ENST00000467915	KRTAP5-8	O75690	187 aa		4.66	□□□□□ -1.66
SGSM3-206	ENST00000467915	KRTAP9-6	A8MVA2	160 aa		4.63	□□□□□ -1.67
SGSM3-206	ENST00000467915	KRTAP9-4	Q9BYQ2	154 aa		4.61	□□□□□ -1.67
SGSM3-206	ENST00000467915	AHNAK	Q09666	5890 aa	Known RBP	4.6	□□□□□ -1.67
SGSM3-206	ENST00000467915	KRTAP6-2	Q3LI66	62 aa		4.59	□□□□□ -1.67
SGSM3-206	ENST00000467915	MUC5AC	P98088	5654 aa		4.58	□□□□□ -1.68
SGSM3-206	ENST00000467915	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.58	□□□□□ -1.68
SGSM3-206	ENST00000467915	KRTAP9-9	Q9BYP9	154 aa		4.42	□□□□□ -1.7
SGSM3-206	ENST00000467915	KRTAP5-1	Q6L8H4	278 aa		4.34	□□□□□ -1.71
SGSM3-206	ENST00000467915	MT3	P25713	68 aa		4.32	□□□□□ -1.72
SGSM3-206	ENST00000467915	LUZP6	Q538Z0	58 aa		4.25	□□□□□ -1.73
SGSM3-206	ENST00000467915	LCE1E	Q5T753	118 aa		4.01	□□□□□ -1.77
SGSM3-206	ENST00000467915	KRTAP4-2	Q9BYR5	136 aa		3.87	□□□□□ -1.79
SGSM3-206	ENST00000467915	LCE1B	Q5T7P3	118 aa		3.86	□□□□□ -1.79
SGSM3-206	ENST00000467915	NDUFAF8	A1L188	74 aa		3.83	□□□□□ -1.8
SGSM3-206	ENST00000467915	LCE1C	Q5T751	118 aa		3.74	□□□□□ -1.81
SGSM3-206	ENST00000467915	KRTAP4-12	Q9BQ66	201 aa		3.63	□□□□□ -1.83
SGSM3-206	ENST00000467915	LCE3D	Q9BYE3	92 aa		3.62	□□□□□ -1.83
SGSM3-206	ENST00000467915	LCE3E	Q5T5B0	92 aa		3.49	□□□□□ -1.85
SGSM3-206	ENST00000467915	KRTAP5-11	Q6L8G4	156 aa		3.4	□□□□□ -1.87
SGSM3-206	ENST00000467915	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.37	□□□□□ -1.87
SGSM3-206	ENST00000467915	LCE1F	Q5T754	118 aa		3.33	□□□□□ -1.88
SGSM3-206	ENST00000467915		A0A0A0MQY5	61 aa		3.32	□□□□□ -1.88
SGSM3-206	ENST00000467915	PHGR1	C9JFL3	82 aa		3.16	□□□□□ -1.9
SGSM3-206	ENST00000467915	INE1	O15225	51 aa		3.16	□□□□□ -1.9
SGSM3-206	ENST00000467915	KRTAP21-2	Q3LI59	83 aa		3.14	□□□□□ -1.91
SGSM3-206	ENST00000467915	KRTAP4-4	Q9BYR3	166 aa		2.96	□□□□□ -1.94
SGSM3-206	ENST00000467915	MUC19	Q7Z5P9	8384 aa		2.9	□□□□□ -1.94
SGSM3-206	ENST00000467915	PRM1	P04553	51 aa		2.86	□□□□□ -1.95
SGSM3-206	ENST00000467915		H3BS24	57 aa		2.71	□□□□□ -1.98
SGSM3-206	ENST00000467915	KRTAP21-1	Q3LI58	79 aa		2.37	□□□□□ -2.03
SGSM3-206	ENST00000467915	MUC16	Q8WXI7	14507 aa		2.09	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 35.9 ms