RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 A0A1B0GU69 56 aa3.81□□□□□ -1.8
HLA-DOA-203ENST00000467465 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
HLA-DOA-203ENST00000467465 A0A0D9SG42 100 aa3.77□□□□□ -1.81
HLA-DOA-203ENST00000467465 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
HLA-DOA-203ENST00000467465 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
HLA-DOA-203ENST00000467465 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
HLA-DOA-203ENST00000467465 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
HLA-DOA-203ENST00000467465 UQCR11O14957 56 aa3.72□□□□□ -1.81
HLA-DOA-203ENST00000467465 PSPHP1O15172 72 aa3.71□□□□□ -1.82
HLA-DOA-203ENST00000467465 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
HLA-DOA-203ENST00000467465 A6NED7 52 aa3.69□□□□□ -1.82
HLA-DOA-203ENST00000467465 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
HLA-DOA-203ENST00000467465 A8MU10 97 aa3.62□□□□□ -1.83
HLA-DOA-203ENST00000467465 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
HLA-DOA-203ENST00000467465 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
HLA-DOA-203ENST00000467465 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
HLA-DOA-203ENST00000467465 K7ERS5 55 aa3.6□□□□□ -1.83
HLA-DOA-203ENST00000467465 MT1EP04732 61 aa3.59□□□□□ -1.83
HLA-DOA-203ENST00000467465 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
HLA-DOA-203ENST00000467465 TNP1P09430 55 aa3.56□□□□□ -1.84
HLA-DOA-203ENST00000467465 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
HLA-DOA-203ENST00000467465 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
HLA-DOA-203ENST00000467465 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
HLA-DOA-203ENST00000467465 MT1GP13640 62 aa3.5□□□□□ -1.85
HLA-DOA-203ENST00000467465 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
HLA-DOA-203ENST00000467465 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
HLA-DOA-203ENST00000467465 MT1LQ93083 61 aa3.44□□□□□ -1.86
HLA-DOA-203ENST00000467465 MT4P47944 62 aa3.43□□□□□ -1.86
HLA-DOA-203ENST00000467465 MT1MQ8N339 61 aa3.42□□□□□ -1.86
HLA-DOA-203ENST00000467465 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
HLA-DOA-203ENST00000467465 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
HLA-DOA-203ENST00000467465 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
HLA-DOA-203ENST00000467465 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
HLA-DOA-203ENST00000467465 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
HLA-DOA-203ENST00000467465 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
HLA-DOA-203ENST00000467465 ROMO1P60602 79 aa3.33□□□□□ -1.88
HLA-DOA-203ENST00000467465 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
HLA-DOA-203ENST00000467465 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
HLA-DOA-203ENST00000467465 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
HLA-DOA-203ENST00000467465 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
HLA-DOA-203ENST00000467465 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
HLA-DOA-203ENST00000467465 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
HLA-DOA-203ENST00000467465 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
HLA-DOA-203ENST00000467465 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
HLA-DOA-203ENST00000467465 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
HLA-DOA-203ENST00000467465 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
HLA-DOA-203ENST00000467465 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
HLA-DOA-203ENST00000467465 MT1AP04731 61 aa2.94□□□□□ -1.94
HLA-DOA-203ENST00000467465 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
HLA-DOA-203ENST00000467465 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
HLA-DOA-203ENST00000467465 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
HLA-DOA-203ENST00000467465 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
HLA-DOA-203ENST00000467465 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
HLA-DOA-203ENST00000467465 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
HLA-DOA-203ENST00000467465 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
HLA-DOA-203ENST00000467465 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
HLA-DOA-203ENST00000467465 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
HLA-DOA-203ENST00000467465 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
HLA-DOA-203ENST00000467465 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
HLA-DOA-203ENST00000467465 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
HLA-DOA-203ENST00000467465 MT3P25713 68 aa2.71□□□□□ -1.98
HLA-DOA-203ENST00000467465 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
HLA-DOA-203ENST00000467465 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
HLA-DOA-203ENST00000467465 INE1O15225 51 aa2.56□□□□□ -2
HLA-DOA-203ENST00000467465 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
HLA-DOA-203ENST00000467465 LCE1EQ5T753 118 aa2.55□□□□□ -2
HLA-DOA-203ENST00000467465 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
HLA-DOA-203ENST00000467465 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
HLA-DOA-203ENST00000467465 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
HLA-DOA-203ENST00000467465 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
HLA-DOA-203ENST00000467465 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
HLA-DOA-203ENST00000467465 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
HLA-DOA-203ENST00000467465 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
HLA-DOA-203ENST00000467465 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
HLA-DOA-203ENST00000467465 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
HLA-DOA-203ENST00000467465 PRM1P04553 51 aa1.68□□□□□ -2.14
HLA-DOA-203ENST00000467465 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
HLA-DOA-203ENST00000467465 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 61.2 ms