RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
UBR4-210ENST00000466969 LOC101927531A0A1B0GV80 90 aa4.34□□□□□ -1.71
UBR4-210ENST00000466969 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
UBR4-210ENST00000466969 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
UBR4-210ENST00000466969 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
UBR4-210ENST00000466969 Q1T7F1 81 aa4.3□□□□□ -1.72
UBR4-210ENST00000466969 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
UBR4-210ENST00000466969 MT1LQ93083 61 aa4.3□□□□□ -1.72
UBR4-210ENST00000466969 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
UBR4-210ENST00000466969 P0C880 135 aa4.28□□□□□ -1.72
UBR4-210ENST00000466969 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
UBR4-210ENST00000466969 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
UBR4-210ENST00000466969 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
UBR4-210ENST00000466969 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
UBR4-210ENST00000466969 PSPHP1O15172 72 aa4.19□□□□□ -1.74
UBR4-210ENST00000466969 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
UBR4-210ENST00000466969 H0Y9P7 68 aa4.15□□□□□ -1.75
UBR4-210ENST00000466969 SPANXA2-OT1Q8N9U9 137 aa4.13□□□□□ -1.75
UBR4-210ENST00000466969 H3BPC8 53 aa4.12□□□□□ -1.75
UBR4-210ENST00000466969 CHKB-CPT1BH3BT56 60 aa4.12□□□□□ -1.75
UBR4-210ENST00000466969 MP68P56378 58 aa4.12□□□□□ -1.75
UBR4-210ENST00000466969 LINC00208Q96KT6 92 aa4.11□□□□□ -1.75
UBR4-210ENST00000466969 PRR15LQ9BU68 103 aa4.11□□□□□ -1.75
UBR4-210ENST00000466969 A0A0D9SG42 100 aa4.1□□□□□ -1.75
UBR4-210ENST00000466969 A8MU10 97 aa4.09□□□□□ -1.75
UBR4-210ENST00000466969 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
UBR4-210ENST00000466969 SPTSSBQ8NFR3 76 aa4.07□□□□□ -1.76
UBR4-210ENST00000466969 A6NED7 52 aa4.06□□□□□ -1.76
UBR4-210ENST00000466969 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
UBR4-210ENST00000466969 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
UBR4-210ENST00000466969 COA5Q86WW8 74 aa4.03□□□□□ -1.76
UBR4-210ENST00000466969 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
UBR4-210ENST00000466969 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
UBR4-210ENST00000466969 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
UBR4-210ENST00000466969 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
UBR4-210ENST00000466969 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
UBR4-210ENST00000466969 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
UBR4-210ENST00000466969 SPATA8Q6RVD6 105 aa3.83□□□□□ -1.8
UBR4-210ENST00000466969 ACYP2P14621 99 aa3.82□□□□□ -1.8
UBR4-210ENST00000466969 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
UBR4-210ENST00000466969 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
UBR4-210ENST00000466969 A0A1B0GU69 56 aa3.79□□□□□ -1.8
UBR4-210ENST00000466969 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
UBR4-210ENST00000466969 UQCR11O14957 56 aa3.77□□□□□ -1.81
UBR4-210ENST00000466969 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
UBR4-210ENST00000466969 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
UBR4-210ENST00000466969 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
UBR4-210ENST00000466969 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
UBR4-210ENST00000466969 MT1AP04731 61 aa3.65□□□□□ -1.83
UBR4-210ENST00000466969 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
UBR4-210ENST00000466969 ROMO1P60602 79 aa3.64□□□□□ -1.83
UBR4-210ENST00000466969 TNP1P09430 55 aa3.57□□□□□ -1.84
UBR4-210ENST00000466969 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
UBR4-210ENST00000466969 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
UBR4-210ENST00000466969 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
UBR4-210ENST00000466969 A0A1B0GU33 70 aa3.51□□□□□ -1.85
UBR4-210ENST00000466969 K7ERS5 55 aa3.51□□□□□ -1.85
UBR4-210ENST00000466969 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
UBR4-210ENST00000466969 MT3P25713 68 aa3.41□□□□□ -1.86
UBR4-210ENST00000466969 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
UBR4-210ENST00000466969 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
UBR4-210ENST00000466969 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
UBR4-210ENST00000466969 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
UBR4-210ENST00000466969 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
UBR4-210ENST00000466969 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
UBR4-210ENST00000466969 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
UBR4-210ENST00000466969 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
UBR4-210ENST00000466969 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
UBR4-210ENST00000466969 INE1O15225 51 aa2.8□□□□□ -1.96
UBR4-210ENST00000466969 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
UBR4-210ENST00000466969 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
UBR4-210ENST00000466969 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
UBR4-210ENST00000466969 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
UBR4-210ENST00000466969 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
UBR4-210ENST00000466969 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
UBR4-210ENST00000466969 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
UBR4-210ENST00000466969 PRM1P04553 51 aa1.85□□□□□ -2.11
UBR4-210ENST00000466969 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 108 ms