RNA–Protein interactions for RNA: ENST00000466662.1

PNCK-223, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 3

Gene PNCK, Length 464 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-223	ENST00000466662	LCE3B	Q5TA77	95 aa		6.68	□□□□□ -1.34
PNCK-223	ENST00000466662	LCE5A	Q5TCM9	118 aa		6.63	□□□□□ -1.35
PNCK-223	ENST00000466662	KRTAP19-3	Q7Z4W3	81 aa		6.62	□□□□□ -1.35
PNCK-223	ENST00000466662	C10orf95	Q9H7T3	257 aa		6.61	□□□□□ -1.35
PNCK-223	ENST00000466662		K7ERS5	55 aa		6.59	□□□□□ -1.35
PNCK-223	ENST00000466662	KRTAP19-5	Q3LI72	72 aa		6.59	□□□□□ -1.35
PNCK-223	ENST00000466662	TNP1	P09430	55 aa		6.57	□□□□□ -1.36
PNCK-223	ENST00000466662	LCE3A	Q5TA76	89 aa		6.51	□□□□□ -1.37
PNCK-223	ENST00000466662	PRAC1	Q96KF2	57 aa		6.5	□□□□□ -1.37
PNCK-223	ENST00000466662	DST	Q03001	7570 aa	Known RBP	6.5	□□□□□ -1.37
PNCK-223	ENST00000466662	MT1G	P13640	62 aa		6.48	□□□□□ -1.37
PNCK-223	ENST00000466662	MT1L	Q93083	61 aa		6.42	□□□□□ -1.38
PNCK-223	ENST00000466662	PP632	Q6XCG6	107 aa		6.41	□□□□□ -1.38
PNCK-223	ENST00000466662	MT1M	Q8N339	61 aa		6.37	□□□□□ -1.39
PNCK-223	ENST00000466662	KRTAP25-1	Q3LHN0	102 aa		6.34	□□□□□ -1.39
PNCK-223	ENST00000466662	ROMO1	P60602	79 aa		6.29	□□□□□ -1.4
PNCK-223	ENST00000466662	KRTAP12-3	P60328	96 aa		6.26	□□□□□ -1.41
PNCK-223	ENST00000466662	KRTAP4-3	Q9BYR4	195 aa		6.2	□□□□□ -1.42
PNCK-223	ENST00000466662	KRTAP4-9	Q9BYQ8	210 aa		6.17	□□□□□ -1.42
PNCK-223	ENST00000466662	LCE4A	Q5TA78	99 aa		6.1	□□□□□ -1.43
PNCK-223	ENST00000466662	KRTAP4-7	Q9BYR0	210 aa		6.08	□□□□□ -1.44
PNCK-223	ENST00000466662	LCE1D	Q5T752	114 aa		6.07	□□□□□ -1.44
PNCK-223	ENST00000466662	KRTAP23-1	A1A580	65 aa		6.04	□□□□□ -1.44
PNCK-223	ENST00000466662	KRTAP5-4	Q6L8H1	288 aa		6.03	□□□□□ -1.44
PNCK-223	ENST00000466662	MT4	P47944	62 aa		5.99	□□□□□ -1.45
PNCK-223	ENST00000466662	HMCN1	Q96RW7	5635 aa		5.95	□□□□□ -1.46
PNCK-223	ENST00000466662	KRTAP19-4	Q3LI73	84 aa		5.93	□□□□□ -1.46
PNCK-223	ENST00000466662	GPR98	Q8WXG9	6306 aa		5.92	□□□□□ -1.46
PNCK-223	ENST00000466662	KRTAP15-1	Q3LI76	137 aa		5.88	□□□□□ -1.47
PNCK-223	ENST00000466662	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.85	□□□□□ -1.47
PNCK-223	ENST00000466662	KRTAP4-6	Q9BYQ5	205 aa		5.85	□□□□□ -1.47
PNCK-223	ENST00000466662		H3BS24	57 aa		5.81	□□□□□ -1.48
PNCK-223	ENST00000466662	LCE3C	Q5T5A8	94 aa		5.77	□□□□□ -1.49
PNCK-223	ENST00000466662	LOC100996750	A0A140TA64	210 aa		5.75	□□□□□ -1.49
PNCK-223	ENST00000466662	AHNAK2	Q8IVF2	5795 aa		5.7	□□□□□ -1.5
PNCK-223	ENST00000466662	KRTAP20-2	Q3LI61	65 aa		5.67	□□□□□ -1.5
PNCK-223	ENST00000466662	SPRR5	A0A1B0GTR4	108 aa		5.66	□□□□□ -1.5
PNCK-223	ENST00000466662	KRTAP12-4	P60329	112 aa		5.63	□□□□□ -1.51
PNCK-223	ENST00000466662	SYNE1	Q8NF91	8797 aa	Known RBP	5.62	□□□□□ -1.51
PNCK-223	ENST00000466662	KRTAP5-10	Q6L8G5	202 aa		5.6	□□□□□ -1.51
PNCK-223	ENST00000466662	NDUFAF8	A1L188	74 aa		5.52	□□□□□ -1.53
PNCK-223	ENST00000466662	KRTAP5-3	Q6L8H2	238 aa		5.51	□□□□□ -1.53
PNCK-223	ENST00000466662	MT1A	P04731	61 aa		5.47	□□□□□ -1.53
PNCK-223	ENST00000466662	KRTAP9-6	A8MVA2	160 aa		5.46	□□□□□ -1.54
PNCK-223	ENST00000466662	KRTAP6-1	Q3LI64	71 aa		5.42	□□□□□ -1.54
PNCK-223	ENST00000466662	LUZP6	Q538Z0	58 aa		5.42	□□□□□ -1.54
PNCK-223	ENST00000466662	KRTAP5-7	Q6L8G8	165 aa		5.37	□□□□□ -1.55
PNCK-223	ENST00000466662	KRTAP5-2	Q701N4	177 aa		5.32	□□□□□ -1.56
PNCK-223	ENST00000466662	KRTAP9-4	Q9BYQ2	154 aa		5.25	□□□□□ -1.57
PNCK-223	ENST00000466662		A0A0A0MQY5	61 aa		5.17	□□□□□ -1.58
PNCK-223	ENST00000466662	KRTAP6-2	Q3LI66	62 aa		5.15	□□□□□ -1.59
PNCK-223	ENST00000466662	KRTAP4-11	Q9BYQ6	195 aa		5.14	□□□□□ -1.59
PNCK-223	ENST00000466662	OBSCN	Q5VST9	7968 aa		5	□□□□□ -1.61
PNCK-223	ENST00000466662	KRTAP5-8	O75690	187 aa		4.98	□□□□□ -1.61
PNCK-223	ENST00000466662	MT3	P25713	68 aa		4.98	□□□□□ -1.61
PNCK-223	ENST00000466662	INE1	O15225	51 aa		4.74	□□□□□ -1.65
PNCK-223	ENST00000466662	KRTAP5-1	Q6L8H4	278 aa		4.73	□□□□□ -1.65
PNCK-223	ENST00000466662	KRTAP9-9	Q9BYP9	154 aa		4.68	□□□□□ -1.66
PNCK-223	ENST00000466662	MUC5AC	P98088	5654 aa		4.66	□□□□□ -1.66
PNCK-223	ENST00000466662	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.64	□□□□□ -1.67
PNCK-223	ENST00000466662	AHNAK	Q09666	5890 aa	Known RBP	4.61	□□□□□ -1.67
PNCK-223	ENST00000466662	LCE1E	Q5T753	118 aa		4.57	□□□□□ -1.68
PNCK-223	ENST00000466662	KRTAP4-2	Q9BYR5	136 aa		4.31	□□□□□ -1.72
PNCK-223	ENST00000466662	LCE1B	Q5T7P3	118 aa		4.25	□□□□□ -1.73
PNCK-223	ENST00000466662	LCE1C	Q5T751	118 aa		4.24	□□□□□ -1.73
PNCK-223	ENST00000466662	LCE3D	Q9BYE3	92 aa		4.17	□□□□□ -1.74
PNCK-223	ENST00000466662	LCE3E	Q5T5B0	92 aa		3.94	□□□□□ -1.78
PNCK-223	ENST00000466662	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.89	□□□□□ -1.79
PNCK-223	ENST00000466662	KRTAP5-11	Q6L8G4	156 aa		3.85	□□□□□ -1.79
PNCK-223	ENST00000466662	KRTAP4-12	Q9BQ66	201 aa		3.82	□□□□□ -1.8
PNCK-223	ENST00000466662	LCE1F	Q5T754	118 aa		3.71	□□□□□ -1.82
PNCK-223	ENST00000466662	KRTAP21-2	Q3LI59	83 aa		3.58	□□□□□ -1.84
PNCK-223	ENST00000466662	PHGR1	C9JFL3	82 aa		3.31	□□□□□ -1.88
PNCK-223	ENST00000466662	PRM1	P04553	51 aa		3.26	□□□□□ -1.89
PNCK-223	ENST00000466662	KRTAP4-4	Q9BYR3	166 aa		3.22	□□□□□ -1.89
PNCK-223	ENST00000466662	MUC19	Q7Z5P9	8384 aa		3.07	□□□□□ -1.92
PNCK-223	ENST00000466662	KRTAP21-1	Q3LI58	79 aa		2.46	□□□□□ -2.02
PNCK-223	ENST00000466662	MUC16	Q8WXI7	14507 aa		2.18	□□□□□ -2.06

Retrieved 78 of 20,778 RNA–protein pairs in 7.1 ms