RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
ABCF3-205ENST00000466416 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
ABCF3-205ENST00000466416 MT4P47944 62 aa3.59□□□□□ -1.83
ABCF3-205ENST00000466416 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
ABCF3-205ENST00000466416 KRTAP13-4Q3LI77 160 aa3.58□□□□□ -1.84
ABCF3-205ENST00000466416 K7ERS5 55 aa3.57□□□□□ -1.84
ABCF3-205ENST00000466416 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
ABCF3-205ENST00000466416 R4GN34 69 aa3.54□□□□□ -1.84
ABCF3-205ENST00000466416 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
ABCF3-205ENST00000466416 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
ABCF3-205ENST00000466416 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
ABCF3-205ENST00000466416 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
ABCF3-205ENST00000466416 A0A0D9SG42 100 aa3.47□□□□□ -1.85
ABCF3-205ENST00000466416 ROMO1P60602 79 aa3.44□□□□□ -1.86
ABCF3-205ENST00000466416 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
ABCF3-205ENST00000466416 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
ABCF3-205ENST00000466416 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
ABCF3-205ENST00000466416 MT1EP04732 61 aa3.43□□□□□ -1.86
ABCF3-205ENST00000466416 SPINT4Q6UDR6 99 aa3.41□□□□□ -1.86
ABCF3-205ENST00000466416 MT1GP13640 62 aa3.4□□□□□ -1.87
ABCF3-205ENST00000466416 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
ABCF3-205ENST00000466416 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
ABCF3-205ENST00000466416 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
ABCF3-205ENST00000466416 MT1MQ8N339 61 aa3.31□□□□□ -1.88
ABCF3-205ENST00000466416 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
ABCF3-205ENST00000466416 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
ABCF3-205ENST00000466416 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
ABCF3-205ENST00000466416 KRTAP23-1A1A580 65 aa3.26□□□□□ -1.89
ABCF3-205ENST00000466416 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
ABCF3-205ENST00000466416 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
ABCF3-205ENST00000466416 MT1LQ93083 61 aa3.2□□□□□ -1.9
ABCF3-205ENST00000466416 TNP1P09430 55 aa3.19□□□□□ -1.9
ABCF3-205ENST00000466416 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
ABCF3-205ENST00000466416 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
ABCF3-205ENST00000466416 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
ABCF3-205ENST00000466416 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
ABCF3-205ENST00000466416 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
ABCF3-205ENST00000466416 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
ABCF3-205ENST00000466416 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
ABCF3-205ENST00000466416 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
ABCF3-205ENST00000466416 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
ABCF3-205ENST00000466416 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
ABCF3-205ENST00000466416 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
ABCF3-205ENST00000466416 KRTAP15-1Q3LI76 137 aa3□□□□□ -1.93
ABCF3-205ENST00000466416 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
ABCF3-205ENST00000466416 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
ABCF3-205ENST00000466416 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
ABCF3-205ENST00000466416 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
ABCF3-205ENST00000466416 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
ABCF3-205ENST00000466416 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
ABCF3-205ENST00000466416 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
ABCF3-205ENST00000466416 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
ABCF3-205ENST00000466416 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
ABCF3-205ENST00000466416 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
ABCF3-205ENST00000466416 MT1AP04731 61 aa2.73□□□□□ -1.97
ABCF3-205ENST00000466416 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
ABCF3-205ENST00000466416 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
ABCF3-205ENST00000466416 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
ABCF3-205ENST00000466416 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
ABCF3-205ENST00000466416 MT3P25713 68 aa2.54□□□□□ -2
ABCF3-205ENST00000466416 H3BS24 57 aa2.53□□□□□ -2
ABCF3-205ENST00000466416 A0A0A0MQY5 61 aa2.48□□□□□ -2.01
ABCF3-205ENST00000466416 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
ABCF3-205ENST00000466416 INE1O15225 51 aa2.36□□□□□ -2.03
ABCF3-205ENST00000466416 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
ABCF3-205ENST00000466416 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
ABCF3-205ENST00000466416 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
ABCF3-205ENST00000466416 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
ABCF3-205ENST00000466416 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
ABCF3-205ENST00000466416 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
ABCF3-205ENST00000466416 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
ABCF3-205ENST00000466416 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
ABCF3-205ENST00000466416 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
ABCF3-205ENST00000466416 PRM1P04553 51 aa1.75□□□□□ -2.13
ABCF3-205ENST00000466416 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
ABCF3-205ENST00000466416 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
ABCF3-205ENST00000466416 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
ABCF3-205ENST00000466416 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms