RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 KRTAP2-2Q9BYT5 123 aa8.3□□□□□ -1.08
SNX21-208ENST00000466252 KRTAP2-1Q9BYU5 128 aa8.3□□□□□ -1.08
SNX21-208ENST00000466252 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
SNX21-208ENST00000466252 MT1GP13640 62 aa8.25□□□□□ -1.09
SNX21-208ENST00000466252 MT1LQ93083 61 aa8.22□□□□□ -1.09
SNX21-208ENST00000466252 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.1
SNX21-208ENST00000466252 KRTAP12-3P60328 96 aa8.15□□□□□ -1.1
SNX21-208ENST00000466252 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
SNX21-208ENST00000466252 MT1MQ8N339 61 aa8.1□□□□□ -1.11
SNX21-208ENST00000466252 KRTAP23-1A1A580 65 aa8.08□□□□□ -1.12
SNX21-208ENST00000466252 DSTQ03001 7570 aaKnown RBP8.05□□□□□ -1.12
SNX21-208ENST00000466252 ROMO1P60602 79 aa8.02□□□□□ -1.13
SNX21-208ENST00000466252 KRTAP4-3Q9BYR4 195 aa7.92□□□□□ -1.14
SNX21-208ENST00000466252 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
SNX21-208ENST00000466252 KRTAP19-4Q3LI73 84 aa7.76□□□□□ -1.17
SNX21-208ENST00000466252 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
SNX21-208ENST00000466252 BRK1Q8WUW1 75 aa7.65□□□□□ -1.18
SNX21-208ENST00000466252 KRTAP4-9Q9BYQ8 210 aa7.61□□□□□ -1.19
SNX21-208ENST00000466252 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
SNX21-208ENST00000466252 LCE3CQ5T5A8 94 aa7.56□□□□□ -1.2
SNX21-208ENST00000466252 KRTAP5-4Q6L8H1 288 aa7.56□□□□□ -1.2
SNX21-208ENST00000466252 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
SNX21-208ENST00000466252 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
SNX21-208ENST00000466252 KRTAP5-5Q701N2 237 aaPredicted RBP7.43□□□□□ -1.22
SNX21-208ENST00000466252 MT4P47944 62 aa7.41□□□□□ -1.22
SNX21-208ENST00000466252 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
SNX21-208ENST00000466252 PMAIP1Q13794 54 aa7.24□□□□□ -1.25
SNX21-208ENST00000466252 HMCN1Q96RW7 5635 aa7.21□□□□□ -1.26
SNX21-208ENST00000466252 KRTAP9-6A8MVA2 160 aa7.17□□□□□ -1.26
SNX21-208ENST00000466252 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
SNX21-208ENST00000466252 KRTAP12-4P60329 112 aa7.08□□□□□ -1.28
SNX21-208ENST00000466252 SYNE1Q8NF91 8797 aaKnown RBP7.06□□□□□ -1.28
SNX21-208ENST00000466252 KRTAP20-2Q3LI61 65 aa7.06□□□□□ -1.28
SNX21-208ENST00000466252 MT1AP04731 61 aa7□□□□□ -1.29
SNX21-208ENST00000466252 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
SNX21-208ENST00000466252 KRTAP6-1Q3LI64 71 aa6.95□□□□□ -1.3
SNX21-208ENST00000466252 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
SNX21-208ENST00000466252 PRAC1Q96KF2 57 aa6.9□□□□□ -1.3
SNX21-208ENST00000466252 GPR98Q8WXG9 6306 aa6.88□□□□□ -1.31
SNX21-208ENST00000466252 AHNAK2Q8IVF2 5795 aa6.83□□□□□ -1.32
SNX21-208ENST00000466252 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
SNX21-208ENST00000466252 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
SNX21-208ENST00000466252 KRTAP5-2Q701N4 177 aa6.68□□□□□ -1.34
SNX21-208ENST00000466252 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
SNX21-208ENST00000466252 KRTAP6-2Q3LI66 62 aa6.55□□□□□ -1.36
SNX21-208ENST00000466252 KRTAP5-7Q6L8G8 165 aa6.46□□□□□ -1.38
SNX21-208ENST00000466252 MT3P25713 68 aa6.38□□□□□ -1.39
SNX21-208ENST00000466252 KRTAP4-11Q9BYQ6 195 aa6.37□□□□□ -1.39
SNX21-208ENST00000466252 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
SNX21-208ENST00000466252 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
SNX21-208ENST00000466252 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
SNX21-208ENST00000466252 KRTAP5-1Q6L8H4 278 aa5.93□□□□□ -1.46
SNX21-208ENST00000466252 LCE1EQ5T753 118 aa5.8□□□□□ -1.48
SNX21-208ENST00000466252 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
SNX21-208ENST00000466252 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
SNX21-208ENST00000466252 MUC5ACP98088 5654 aa5.65□□□□□ -1.5
SNX21-208ENST00000466252 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
SNX21-208ENST00000466252 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
SNX21-208ENST00000466252 KRTAP4-2Q9BYR5 136 aa5.46□□□□□ -1.54
SNX21-208ENST00000466252 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
SNX21-208ENST00000466252 LCE1CQ5T751 118 aa5.39□□□□□ -1.55
SNX21-208ENST00000466252 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
SNX21-208ENST00000466252 LCE3EQ5T5B0 92 aa5.25□□□□□ -1.57
SNX21-208ENST00000466252 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.62
SNX21-208ENST00000466252 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
SNX21-208ENST00000466252 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
SNX21-208ENST00000466252 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
SNX21-208ENST00000466252 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
SNX21-208ENST00000466252 KRTAP21-2Q3LI59 83 aa4.6□□□□□ -1.67
SNX21-208ENST00000466252 PHGR1C9JFL3 82 aa4.17□□□□□ -1.74
SNX21-208ENST00000466252 PRM1P04553 51 aa4.12□□□□□ -1.75
SNX21-208ENST00000466252 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
SNX21-208ENST00000466252 INE1O15225 51 aa4.01□□□□□ -1.77
SNX21-208ENST00000466252 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
SNX21-208ENST00000466252 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
SNX21-208ENST00000466252 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
SNX21-208ENST00000466252 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
SNX21-208ENST00000466252 H3BS24 57 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms