RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 MT1EP04732 61 aa5.88□□□□□ -1.47
AGRN-204ENST00000466223 SPRR2DP22532 72 aa5.87□□□□□ -1.47
AGRN-204ENST00000466223 ROMO1P60602 79 aa5.8□□□□□ -1.48
AGRN-204ENST00000466223 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
AGRN-204ENST00000466223 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
AGRN-204ENST00000466223 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
AGRN-204ENST00000466223 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
AGRN-204ENST00000466223 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
AGRN-204ENST00000466223 MT1GP13640 62 aa5.71□□□□□ -1.5
AGRN-204ENST00000466223 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
AGRN-204ENST00000466223 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
AGRN-204ENST00000466223 MT1LQ93083 61 aa5.67□□□□□ -1.5
AGRN-204ENST00000466223 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
AGRN-204ENST00000466223 H3BS24 57 aa5.63□□□□□ -1.51
AGRN-204ENST00000466223 MT1MQ8N339 61 aa5.58□□□□□ -1.52
AGRN-204ENST00000466223 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
AGRN-204ENST00000466223 GPR98Q8WXG9 6306 aa5.55□□□□□ -1.52
AGRN-204ENST00000466223 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
AGRN-204ENST00000466223 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
AGRN-204ENST00000466223 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
AGRN-204ENST00000466223 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
AGRN-204ENST00000466223 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
AGRN-204ENST00000466223 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
AGRN-204ENST00000466223 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
AGRN-204ENST00000466223 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
AGRN-204ENST00000466223 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
AGRN-204ENST00000466223 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
AGRN-204ENST00000466223 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
AGRN-204ENST00000466223 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
AGRN-204ENST00000466223 MT4P47944 62 aa5.16□□□□□ -1.58
AGRN-204ENST00000466223 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
AGRN-204ENST00000466223 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
AGRN-204ENST00000466223 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
AGRN-204ENST00000466223 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
AGRN-204ENST00000466223 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
AGRN-204ENST00000466223 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
AGRN-204ENST00000466223 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
AGRN-204ENST00000466223 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
AGRN-204ENST00000466223 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
AGRN-204ENST00000466223 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
AGRN-204ENST00000466223 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
AGRN-204ENST00000466223 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
AGRN-204ENST00000466223 MT1AP04731 61 aa4.84□□□□□ -1.63
AGRN-204ENST00000466223 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
AGRN-204ENST00000466223 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
AGRN-204ENST00000466223 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
AGRN-204ENST00000466223 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
AGRN-204ENST00000466223 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
AGRN-204ENST00000466223 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
AGRN-204ENST00000466223 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
AGRN-204ENST00000466223 MT3P25713 68 aa4.46□□□□□ -1.7
AGRN-204ENST00000466223 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
AGRN-204ENST00000466223 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
AGRN-204ENST00000466223 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
AGRN-204ENST00000466223 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
AGRN-204ENST00000466223 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
AGRN-204ENST00000466223 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
AGRN-204ENST00000466223 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
AGRN-204ENST00000466223 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
AGRN-204ENST00000466223 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
AGRN-204ENST00000466223 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
AGRN-204ENST00000466223 LCE1EQ5T753 118 aa4□□□□□ -1.77
AGRN-204ENST00000466223 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
AGRN-204ENST00000466223 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
AGRN-204ENST00000466223 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
AGRN-204ENST00000466223 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
AGRN-204ENST00000466223 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
AGRN-204ENST00000466223 INE1O15225 51 aa3.49□□□□□ -1.85
AGRN-204ENST00000466223 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
AGRN-204ENST00000466223 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
AGRN-204ENST00000466223 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
AGRN-204ENST00000466223 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
AGRN-204ENST00000466223 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
AGRN-204ENST00000466223 PRM1P04553 51 aa2.96□□□□□ -1.94
AGRN-204ENST00000466223 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
AGRN-204ENST00000466223 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
AGRN-204ENST00000466223 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
AGRN-204ENST00000466223 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms