RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
CD40-204ENST00000466205 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
CD40-204ENST00000466205 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
CD40-204ENST00000466205 UQCR11O14957 56 aa3.91□□□□□ -1.78
CD40-204ENST00000466205 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
CD40-204ENST00000466205 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
CD40-204ENST00000466205 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
CD40-204ENST00000466205 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
CD40-204ENST00000466205 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
CD40-204ENST00000466205 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
CD40-204ENST00000466205 MT1EP04732 61 aa3.79□□□□□ -1.8
CD40-204ENST00000466205 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
CD40-204ENST00000466205 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
CD40-204ENST00000466205 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
CD40-204ENST00000466205 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
CD40-204ENST00000466205 TNP1P09430 55 aa3.72□□□□□ -1.81
CD40-204ENST00000466205 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
CD40-204ENST00000466205 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
CD40-204ENST00000466205 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
CD40-204ENST00000466205 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
CD40-204ENST00000466205 K7ERS5 55 aa3.71□□□□□ -1.82
CD40-204ENST00000466205 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
CD40-204ENST00000466205 MT1GP13640 62 aa3.63□□□□□ -1.83
CD40-204ENST00000466205 MT1LQ93083 61 aa3.63□□□□□ -1.83
CD40-204ENST00000466205 MT1MQ8N339 61 aa3.61□□□□□ -1.83
CD40-204ENST00000466205 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
CD40-204ENST00000466205 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
CD40-204ENST00000466205 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
CD40-204ENST00000466205 ROMO1P60602 79 aa3.55□□□□□ -1.84
CD40-204ENST00000466205 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
CD40-204ENST00000466205 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
CD40-204ENST00000466205 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
CD40-204ENST00000466205 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
CD40-204ENST00000466205 MT4P47944 62 aa3.47□□□□□ -1.85
CD40-204ENST00000466205 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.85
CD40-204ENST00000466205 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
CD40-204ENST00000466205 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CD40-204ENST00000466205 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
CD40-204ENST00000466205 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
CD40-204ENST00000466205 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
CD40-204ENST00000466205 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
CD40-204ENST00000466205 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
CD40-204ENST00000466205 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
CD40-204ENST00000466205 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
CD40-204ENST00000466205 MT3P25713 68 aa3.2□□□□□ -1.9
CD40-204ENST00000466205 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
CD40-204ENST00000466205 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
CD40-204ENST00000466205 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
CD40-204ENST00000466205 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
CD40-204ENST00000466205 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
CD40-204ENST00000466205 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
CD40-204ENST00000466205 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
CD40-204ENST00000466205 MT1AP04731 61 aa3.07□□□□□ -1.92
CD40-204ENST00000466205 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
CD40-204ENST00000466205 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
CD40-204ENST00000466205 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
CD40-204ENST00000466205 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
CD40-204ENST00000466205 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
CD40-204ENST00000466205 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
CD40-204ENST00000466205 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
CD40-204ENST00000466205 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
CD40-204ENST00000466205 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
CD40-204ENST00000466205 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
CD40-204ENST00000466205 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
CD40-204ENST00000466205 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CD40-204ENST00000466205 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
CD40-204ENST00000466205 INE1O15225 51 aa2.45□□□□□ -2.02
CD40-204ENST00000466205 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
CD40-204ENST00000466205 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
CD40-204ENST00000466205 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
CD40-204ENST00000466205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
CD40-204ENST00000466205 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
CD40-204ENST00000466205 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
CD40-204ENST00000466205 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
CD40-204ENST00000466205 PRM1P04553 51 aa1.86□□□□□ -2.11
CD40-204ENST00000466205 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
CD40-204ENST00000466205 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
CD40-204ENST00000466205 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 141.4 ms