RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 CMC2Q9NRP2 79 aa-2.22□□□□□ -2.76
XRN1-205ENST00000465507 DMDP11532 3685 aa-2.23□□□□□ -2.77
XRN1-205ENST00000465507 NFAT5O94916 1531 aa-2.23□□□□□ -2.77
XRN1-205ENST00000465507 NRXN3Q9Y4C0 1643 aa-2.24□□□□□ -2.77
XRN1-205ENST00000465507 IQGAP1P46940 1657 aa-2.24□□□□□ -2.77
XRN1-205ENST00000465507 DDX60Q8IY21 1712 aaKnown RBP-2.24□□□□□ -2.77
XRN1-205ENST00000465507 CEP250Q9BV73 2442 aa-2.24□□□□□ -2.77
XRN1-205ENST00000465507 ABCC8Q09428 1581 aa-2.25□□□□□ -2.77
XRN1-205ENST00000465507 SZT2Q5T011 3432 aa-2.26□□□□□ -2.77
XRN1-205ENST00000465507 CEP350Q5VT06 3117 aa-2.26□□□□□ -2.77
XRN1-205ENST00000465507 KRTAP20-1Q3LI63 56 aa-2.28□□□□□ -2.77
XRN1-205ENST00000465507 FANCD2Q9BXW9 1451 aa-2.28□□□□□ -2.77
XRN1-205ENST00000465507 SPEGQ15772 3267 aa-2.29□□□□□ -2.78
XRN1-205ENST00000465507 CLTCL1P53675 1640 aa-2.29□□□□□ -2.78
XRN1-205ENST00000465507 NDUFA1O15239 70 aa-2.3□□□□□ -2.78
XRN1-205ENST00000465507 MT1FP04733 61 aa-2.31□□□□□ -2.78
XRN1-205ENST00000465507 WDFY4Q6ZS81 3184 aa-2.35□□□□□ -2.79
XRN1-205ENST00000465507 MUC3AQ02505 3323 aa-2.45□□□□□ -2.8
XRN1-205ENST00000465507 DNAH12Q6ZR08 3092 aa-2.48□□□□□ -2.81
XRN1-205ENST00000465507 TOMM7Q9P0U1 55 aa-2.48□□□□□ -2.81
XRN1-205ENST00000465507 ERICH3Q5RHP9 1530 aa-2.51□□□□□ -2.81
XRN1-205ENST00000465507 EP400Q96L91 3159 aa-2.52□□□□□ -2.81
XRN1-205ENST00000465507 MKI67P46013 3256 aaKnown RBP-2.54□□□□□ -2.82
XRN1-205ENST00000465507 LINC01590Q5TEZ4 76 aa-2.54□□□□□ -2.82
XRN1-205ENST00000465507 CENPEQ02224 2701 aa-2.55□□□□□ -2.82
XRN1-205ENST00000465507 SNRPGP15A8MWD9 76 aa-2.56□□□□□ -2.82
XRN1-205ENST00000465507 DCHS1Q96JQ0 3298 aa-2.58□□□□□ -2.82
XRN1-205ENST00000465507 KRTAP19-6Q3LI70 58 aa-2.58□□□□□ -2.82
XRN1-205ENST00000465507 RHPN1-AS1Q9BWJ2 59 aa-2.6□□□□□ -2.83
XRN1-205ENST00000465507 XIRP2A4UGR9 3374 aa-2.6□□□□□ -2.83
XRN1-205ENST00000465507 USP34Q70CQ2 3546 aa-2.65□□□□□ -2.83
XRN1-205ENST00000465507 SAMD9LQ8IVG5 1584 aa-2.68□□□□□ -2.84
XRN1-205ENST00000465507 RPL39P62891 51 aaKnown RBP-2.68□□□□□ -2.84
XRN1-205ENST00000465507 DEFB133Q30KQ1 61 aa-2.68□□□□□ -2.84
XRN1-205ENST00000465507 DNAH14Q0VDD8 3507 aa-2.68□□□□□ -2.84
XRN1-205ENST00000465507 DUOX1Q9NRD9 1551 aa-2.7□□□□□ -2.84
XRN1-205ENST00000465507 TTTY10Q9BZA0 68 aa-2.7□□□□□ -2.84
XRN1-205ENST00000465507 A0A096LNI7 61 aa-2.71□□□□□ -2.84
XRN1-205ENST00000465507 UNC80Q8N2C7 3258 aa-2.73□□□□□ -2.85
XRN1-205ENST00000465507 LOC400499M0QZD8 3231 aa-2.74□□□□□ -2.85
XRN1-205ENST00000465507 CFAP47Q6ZTR5 3102 aa-2.74□□□□□ -2.85
XRN1-205ENST00000465507 HTN1P15515 57 aa-2.78□□□□□ -2.85
XRN1-205ENST00000465507 RPL39LQ96EH5 51 aaKnown RBP-2.8□□□□□ -2.86
XRN1-205ENST00000465507 IQGAP2Q13576 1575 aa-2.83□□□□□ -2.86
XRN1-205ENST00000465507 TOMM5Q8N4H5 51 aa-2.83□□□□□ -2.86
XRN1-205ENST00000465507 ASPMQ8IZT6 3477 aa-2.85□□□□□ -2.87
XRN1-205ENST00000465507 ATP7AQ04656 1500 aa-2.87□□□□□ -2.87
XRN1-205ENST00000465507 CD52P31358 61 aa-2.87□□□□□ -2.87
XRN1-205ENST00000465507 DEFB124Q8NES8 71 aa-2.87□□□□□ -2.87
XRN1-205ENST00000465507 TOP2AP11388 1531 aaKnown RBP-2.88□□□□□ -2.87
XRN1-205ENST00000465507 KRTAP19-2Q3LHN2 52 aa-2.95□□□□□ -2.88
XRN1-205ENST00000465507 BRCA2P51587 3418 aa-2.96□□□□□ -2.88
XRN1-205ENST00000465507 DEFB104AQ8WTQ1 72 aa-2.96□□□□□ -2.88
XRN1-205ENST00000465507 MROH2BQ7Z745 1585 aa-2.98□□□□□ -2.89
XRN1-205ENST00000465507 VCANP13611 3396 aa-3.07□□□□□ -2.9
XRN1-205ENST00000465507 H3BUX3 64 aa-3.15□□□□□ -2.91
XRN1-205ENST00000465507 CDH23Q9H251 3354 aa-3.15□□□□□ -2.91
XRN1-205ENST00000465507 CENPFP49454 3210 aa-3.15□□□□□ -2.91
XRN1-205ENST00000465507 LINC01556Q5JQF7 62 aa-3.23□□□□□ -2.93
XRN1-205ENST00000465507 K7EIM0 57 aa-3.25□□□□□ -2.93
XRN1-205ENST00000465507 VPS13AQ96RL7 3174 aa-3.27□□□□□ -2.93
XRN1-205ENST00000465507 ARHGAP5-AS1Q96IT6 56 aa-3.39□□□□□ -2.95
XRN1-205ENST00000465507 SNRPGP62308 76 aaKnown RBP-3.45□□□□□ -2.96
XRN1-205ENST00000465507 PRCDQ00LT1 54 aa-3.47□□□□□ -2.96
XRN1-205ENST00000465507 GCC2Q8IWJ2 1684 aa-3.55□□□□□ -2.98
XRN1-205ENST00000465507 APELAP0DMC3 54 aa-3.56□□□□□ -2.98
XRN1-205ENST00000465507 A0A096LPF7 62 aa-3.57□□□□□ -2.98
XRN1-205ENST00000465507 UTRNP46939 3433 aa-3.62□□□□□ -2.99
XRN1-205ENST00000465507 TMEM167AQ8TBQ9 72 aa-3.64□□□□□ -2.99
XRN1-205ENST00000465507 RPL39P5Q59GN2 51 aa-3.81□□□□□ -3.02
XRN1-205ENST00000465507 H3BSH0 61 aa-3.85□□□□□ -3.03
XRN1-205ENST00000465507 HTN3P15516 51 aa-3.87□□□□□ -3.03
XRN1-205ENST00000465507 DEFB108AA8MXU0 73 aa-3.89□□□□□ -3.03
XRN1-205ENST00000465507 GOLGB1Q14789 3259 aaKnown RBP-3.97□□□□□ -3.05
XRN1-205ENST00000465507 Q9Y3F1 56 aa-4□□□□□ -3.05
XRN1-205ENST00000465507 COX14Q96I36 57 aa-4.34□□□□□ -3.1
XRN1-205ENST00000465507 DEFB108BQ8NET1 73 aa-4.4□□□□□ -3.11
XRN1-205ENST00000465507 STATHP02808 62 aa-4.99□□□□□ -3.21
Retrieved 78 of 20,778 RNA–protein pairs in 52.1 ms