RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 SNURFQ9Y675 71 aa3.57□□□□□ -1.84
GABRE-205ENST00000465405 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
GABRE-205ENST00000465405 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
GABRE-205ENST00000465405 CHKB-CPT1BH3BT56 60 aa3.55□□□□□ -1.84
GABRE-205ENST00000465405 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
GABRE-205ENST00000465405 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
GABRE-205ENST00000465405 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
GABRE-205ENST00000465405 ROMO1P60602 79 aa3.52□□□□□ -1.85
GABRE-205ENST00000465405 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
GABRE-205ENST00000465405 SPANXA2-OT1Q8N9U9 137 aa3.5□□□□□ -1.85
GABRE-205ENST00000465405 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
GABRE-205ENST00000465405 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
GABRE-205ENST00000465405 SPRR2DP22532 72 aa3.44□□□□□ -1.86
GABRE-205ENST00000465405 A8MU10 97 aa3.43□□□□□ -1.86
GABRE-205ENST00000465405 COA5Q86WW8 74 aa3.42□□□□□ -1.86
GABRE-205ENST00000465405 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
GABRE-205ENST00000465405 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
GABRE-205ENST00000465405 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
GABRE-205ENST00000465405 A0A0D9SG42 100 aa3.35□□□□□ -1.87
GABRE-205ENST00000465405 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
GABRE-205ENST00000465405 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
GABRE-205ENST00000465405 A0A1B0GU33 70 aa3.31□□□□□ -1.88
GABRE-205ENST00000465405 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
GABRE-205ENST00000465405 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
GABRE-205ENST00000465405 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
GABRE-205ENST00000465405 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
GABRE-205ENST00000465405 MT1EP04732 61 aa3.28□□□□□ -1.88
GABRE-205ENST00000465405 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
GABRE-205ENST00000465405 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
GABRE-205ENST00000465405 A0A1B0GU69 56 aa3.24□□□□□ -1.89
GABRE-205ENST00000465405 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
GABRE-205ENST00000465405 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
GABRE-205ENST00000465405 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
GABRE-205ENST00000465405 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
GABRE-205ENST00000465405 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
GABRE-205ENST00000465405 MT1GP13640 62 aa3.16□□□□□ -1.9
GABRE-205ENST00000465405 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
GABRE-205ENST00000465405 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
GABRE-205ENST00000465405 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
GABRE-205ENST00000465405 MT1LQ93083 61 aa3.13□□□□□ -1.91
GABRE-205ENST00000465405 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
GABRE-205ENST00000465405 TNP1P09430 55 aa3.12□□□□□ -1.91
GABRE-205ENST00000465405 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
GABRE-205ENST00000465405 MT1MQ8N339 61 aa3.12□□□□□ -1.91
GABRE-205ENST00000465405 UQCR11O14957 56 aa3.1□□□□□ -1.91
GABRE-205ENST00000465405 MT3P25713 68 aa3.05□□□□□ -1.92
GABRE-205ENST00000465405 MT4P47944 62 aa3.03□□□□□ -1.92
GABRE-205ENST00000465405 KRTAP12-3P60328 96 aa3□□□□□ -1.93
GABRE-205ENST00000465405 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
GABRE-205ENST00000465405 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
GABRE-205ENST00000465405 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
GABRE-205ENST00000465405 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
GABRE-205ENST00000465405 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
GABRE-205ENST00000465405 INE1O15225 51 aa2.83□□□□□ -1.96
GABRE-205ENST00000465405 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
GABRE-205ENST00000465405 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
GABRE-205ENST00000465405 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
GABRE-205ENST00000465405 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
GABRE-205ENST00000465405 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
GABRE-205ENST00000465405 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
GABRE-205ENST00000465405 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
GABRE-205ENST00000465405 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
GABRE-205ENST00000465405 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
GABRE-205ENST00000465405 MT1AP04731 61 aa2.65□□□□□ -1.99
GABRE-205ENST00000465405 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
GABRE-205ENST00000465405 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
GABRE-205ENST00000465405 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
GABRE-205ENST00000465405 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
GABRE-205ENST00000465405 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
GABRE-205ENST00000465405 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
GABRE-205ENST00000465405 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
GABRE-205ENST00000465405 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
GABRE-205ENST00000465405 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
GABRE-205ENST00000465405 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
GABRE-205ENST00000465405 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
GABRE-205ENST00000465405 PRM1P04553 51 aa1.46□□□□□ -2.18
GABRE-205ENST00000465405 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
GABRE-205ENST00000465405 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 651 ms