RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
NUDCD3-204ENST00000464812 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
NUDCD3-204ENST00000464812 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
NUDCD3-204ENST00000464812 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
NUDCD3-204ENST00000464812 K7ERS5 55 aa3.59□□□□□ -1.83
NUDCD3-204ENST00000464812 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
NUDCD3-204ENST00000464812 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
NUDCD3-204ENST00000464812 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
NUDCD3-204ENST00000464812 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
NUDCD3-204ENST00000464812 TNP1P09430 55 aa3.47□□□□□ -1.85
NUDCD3-204ENST00000464812 ROMO1P60602 79 aa3.46□□□□□ -1.86
NUDCD3-204ENST00000464812 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
NUDCD3-204ENST00000464812 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
NUDCD3-204ENST00000464812 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
NUDCD3-204ENST00000464812 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
NUDCD3-204ENST00000464812 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
NUDCD3-204ENST00000464812 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
NUDCD3-204ENST00000464812 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
NUDCD3-204ENST00000464812 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
NUDCD3-204ENST00000464812 SPRR2EP22531 72 aa3.35□□□□□ -1.87
NUDCD3-204ENST00000464812 SPRR2BP35325 72 aa3.35□□□□□ -1.87
NUDCD3-204ENST00000464812 SPRR2AP35326 72 aa3.35□□□□□ -1.87
NUDCD3-204ENST00000464812 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
NUDCD3-204ENST00000464812 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
NUDCD3-204ENST00000464812 MT1EP04732 61 aa3.31□□□□□ -1.88
NUDCD3-204ENST00000464812 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
NUDCD3-204ENST00000464812 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
NUDCD3-204ENST00000464812 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
NUDCD3-204ENST00000464812 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
NUDCD3-204ENST00000464812 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
NUDCD3-204ENST00000464812 SPRR2DP22532 72 aa3.22□□□□□ -1.89
NUDCD3-204ENST00000464812 MT3P25713 68 aa3.22□□□□□ -1.89
NUDCD3-204ENST00000464812 MT1LQ93083 61 aa3.21□□□□□ -1.9
NUDCD3-204ENST00000464812 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
NUDCD3-204ENST00000464812 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
NUDCD3-204ENST00000464812 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
NUDCD3-204ENST00000464812 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.91
NUDCD3-204ENST00000464812 MT1MQ8N339 61 aa3.13□□□□□ -1.91
NUDCD3-204ENST00000464812 MT1GP13640 62 aa3.12□□□□□ -1.91
NUDCD3-204ENST00000464812 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
NUDCD3-204ENST00000464812 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
NUDCD3-204ENST00000464812 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
NUDCD3-204ENST00000464812 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
NUDCD3-204ENST00000464812 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
NUDCD3-204ENST00000464812 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
NUDCD3-204ENST00000464812 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
NUDCD3-204ENST00000464812 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
NUDCD3-204ENST00000464812 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
NUDCD3-204ENST00000464812 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
NUDCD3-204ENST00000464812 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
NUDCD3-204ENST00000464812 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
NUDCD3-204ENST00000464812 MT4P47944 62 aa2.85□□□□□ -1.95
NUDCD3-204ENST00000464812 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
NUDCD3-204ENST00000464812 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
NUDCD3-204ENST00000464812 MT1AP04731 61 aa2.73□□□□□ -1.97
NUDCD3-204ENST00000464812 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
NUDCD3-204ENST00000464812 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
NUDCD3-204ENST00000464812 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
NUDCD3-204ENST00000464812 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
NUDCD3-204ENST00000464812 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
NUDCD3-204ENST00000464812 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
NUDCD3-204ENST00000464812 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
NUDCD3-204ENST00000464812 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
NUDCD3-204ENST00000464812 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
NUDCD3-204ENST00000464812 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
NUDCD3-204ENST00000464812 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
NUDCD3-204ENST00000464812 INE1O15225 51 aa2.38□□□□□ -2.03
NUDCD3-204ENST00000464812 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
NUDCD3-204ENST00000464812 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
NUDCD3-204ENST00000464812 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
NUDCD3-204ENST00000464812 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
NUDCD3-204ENST00000464812 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
NUDCD3-204ENST00000464812 PRM1P04553 51 aa1.82□□□□□ -2.12
NUDCD3-204ENST00000464812 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
NUDCD3-204ENST00000464812 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
NUDCD3-204ENST00000464812 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
NUDCD3-204ENST00000464812 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
NUDCD3-204ENST00000464812 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms