RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
PLD3-208ENST00000464586 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
PLD3-208ENST00000464586 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
PLD3-208ENST00000464586 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
PLD3-208ENST00000464586 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
PLD3-208ENST00000464586 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
PLD3-208ENST00000464586 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
PLD3-208ENST00000464586 MT1GP13640 62 aa2.97□□□□□ -1.93
PLD3-208ENST00000464586 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
PLD3-208ENST00000464586 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
PLD3-208ENST00000464586 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
PLD3-208ENST00000464586 ROMO1P60602 79 aa2.96□□□□□ -1.94
PLD3-208ENST00000464586 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
PLD3-208ENST00000464586 KRTAP23-1A1A580 65 aa2.95□□□□□ -1.94
PLD3-208ENST00000464586 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
PLD3-208ENST00000464586 MT1LQ93083 61 aa2.95□□□□□ -1.94
PLD3-208ENST00000464586 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
PLD3-208ENST00000464586 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
PLD3-208ENST00000464586 MT1MQ8N339 61 aa2.9□□□□□ -1.95
PLD3-208ENST00000464586 H3BS24 57 aa2.88□□□□□ -1.95
PLD3-208ENST00000464586 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
PLD3-208ENST00000464586 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
PLD3-208ENST00000464586 KRTAP15-1Q3LI76 137 aa2.81□□□□□ -1.96
PLD3-208ENST00000464586 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
PLD3-208ENST00000464586 KRTAP4-7Q9BYR0 210 aa2.79□□□□□ -1.96
PLD3-208ENST00000464586 LOC100996750A0A140TA64 210 aa2.78□□□□□ -1.96
PLD3-208ENST00000464586 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
PLD3-208ENST00000464586 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
PLD3-208ENST00000464586 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
PLD3-208ENST00000464586 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
PLD3-208ENST00000464586 PMAIP1Q13794 54 aa2.7□□□□□ -1.98
PLD3-208ENST00000464586 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
PLD3-208ENST00000464586 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
PLD3-208ENST00000464586 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
PLD3-208ENST00000464586 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
PLD3-208ENST00000464586 MT4P47944 62 aa2.65□□□□□ -1.99
PLD3-208ENST00000464586 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
PLD3-208ENST00000464586 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
PLD3-208ENST00000464586 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
PLD3-208ENST00000464586 KRTAP12-4P60329 112 aa2.57□□□□□ -2
PLD3-208ENST00000464586 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
PLD3-208ENST00000464586 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
PLD3-208ENST00000464586 PRAC1Q96KF2 57 aa2.54□□□□□ -2
PLD3-208ENST00000464586 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
PLD3-208ENST00000464586 MT1AP04731 61 aa2.52□□□□□ -2.01
PLD3-208ENST00000464586 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
PLD3-208ENST00000464586 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
PLD3-208ENST00000464586 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
PLD3-208ENST00000464586 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
PLD3-208ENST00000464586 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
PLD3-208ENST00000464586 KRTAP9-4Q9BYQ2 154 aa2.45□□□□□ -2.02
PLD3-208ENST00000464586 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
PLD3-208ENST00000464586 SVIPQ8NHG7 77 aa2.36□□□□□ -2.03
PLD3-208ENST00000464586 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
PLD3-208ENST00000464586 MT3P25713 68 aa2.31□□□□□ -2.04
PLD3-208ENST00000464586 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
PLD3-208ENST00000464586 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
PLD3-208ENST00000464586 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
PLD3-208ENST00000464586 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
PLD3-208ENST00000464586 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
PLD3-208ENST00000464586 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
PLD3-208ENST00000464586 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
PLD3-208ENST00000464586 A0A0A0MQY5 61 aa1.96□□□□□ -2.1
PLD3-208ENST00000464586 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
PLD3-208ENST00000464586 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
PLD3-208ENST00000464586 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
PLD3-208ENST00000464586 NDUFAF8A1L188 74 aa1.84□□□□□ -2.11
PLD3-208ENST00000464586 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
PLD3-208ENST00000464586 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
PLD3-208ENST00000464586 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
PLD3-208ENST00000464586 LCE1FQ5T754 118 aa1.67□□□□□ -2.14
PLD3-208ENST00000464586 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
PLD3-208ENST00000464586 INE1O15225 51 aa1.54□□□□□ -2.16
PLD3-208ENST00000464586 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
PLD3-208ENST00000464586 PRM1P04553 51 aa1.51□□□□□ -2.17
PLD3-208ENST00000464586 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
PLD3-208ENST00000464586 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
PLD3-208ENST00000464586 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 36.5 ms