RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 INE1O15225 51 aa1.66□□□□□ -2.14
COL8A1-205ENST00000463753 KRTAP10-7P60409 375 aaPredicted RBP1.66□□□□□ -2.14
COL8A1-205ENST00000463753 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
COL8A1-205ENST00000463753 LCE1FQ5T754 118 aa1.65□□□□□ -2.14
COL8A1-205ENST00000463753 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
COL8A1-205ENST00000463753 LRP2P98164 4655 aa1.64□□□□□ -2.15
COL8A1-205ENST00000463753 USH2AO75445 5202 aa1.63□□□□□ -2.15
COL8A1-205ENST00000463753 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
COL8A1-205ENST00000463753 KRTAP10-12P60413 245 aa1.62□□□□□ -2.15
COL8A1-205ENST00000463753 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
COL8A1-205ENST00000463753 KRTAP10-5P60370 271 aa1.61□□□□□ -2.15
COL8A1-205ENST00000463753 SMR3BP02814 79 aaPredicted RBP1.6□□□□□ -2.15
COL8A1-205ENST00000463753 MT1HP80294 61 aa1.59□□□□□ -2.15
COL8A1-205ENST00000463753 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
COL8A1-205ENST00000463753 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.16
COL8A1-205ENST00000463753 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.16
COL8A1-205ENST00000463753 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.16
COL8A1-205ENST00000463753 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
COL8A1-205ENST00000463753 LPAP08519 4548 aa1.57□□□□□ -2.16
COL8A1-205ENST00000463753 TNP1P09430 55 aa1.56□□□□□ -2.16
COL8A1-205ENST00000463753 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
COL8A1-205ENST00000463753 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
COL8A1-205ENST00000463753 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
COL8A1-205ENST00000463753 LCE3CQ5T5A8 94 aa1.48□□□□□ -2.17
COL8A1-205ENST00000463753 OBSCNQ5VST9 7968 aa1.48□□□□□ -2.17
COL8A1-205ENST00000463753 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
COL8A1-205ENST00000463753 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
COL8A1-205ENST00000463753 LCE3AQ5TA76 89 aa1.46□□□□□ -2.18
COL8A1-205ENST00000463753 SYNE2Q8WXH0 6885 aaKnown RBP1.45□□□□□ -2.18
COL8A1-205ENST00000463753 KMT2DO14686 5537 aa1.44□□□□□ -2.18
COL8A1-205ENST00000463753 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
COL8A1-205ENST00000463753 KRTAP10-10P60014 251 aa1.43□□□□□ -2.18
COL8A1-205ENST00000463753 FSIP2Q5CZC0 6907 aa1.42□□□□□ -2.18
COL8A1-205ENST00000463753 KRTAP4-3Q9BYR4 195 aa1.38□□□□□ -2.19
COL8A1-205ENST00000463753 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
COL8A1-205ENST00000463753 MT2AP02795 61 aa1.38□□□□□ -2.19
COL8A1-205ENST00000463753 KRTAP12-3P60328 96 aa1.36□□□□□ -2.19
COL8A1-205ENST00000463753 SPRR2DP22532 72 aa1.35□□□□□ -2.19
COL8A1-205ENST00000463753 SPRR2EP22531 72 aa1.35□□□□□ -2.19
COL8A1-205ENST00000463753 SPRR2BP35325 72 aa1.35□□□□□ -2.19
COL8A1-205ENST00000463753 SPRR2AP35326 72 aa1.35□□□□□ -2.19
COL8A1-205ENST00000463753 LCE3EQ5T5B0 92 aa1.35□□□□□ -2.19
COL8A1-205ENST00000463753 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.19
COL8A1-205ENST00000463753 KRTAP8-1Q8IUC2 63 aa1.34□□□□□ -2.19
COL8A1-205ENST00000463753 M0R2T5 61 aa1.31□□□□□ -2.2
COL8A1-205ENST00000463753 KRTAP19-8Q3LI54 63 aa1.3□□□□□ -2.2
COL8A1-205ENST00000463753 MT1FP04733 61 aa1.29□□□□□ -2.2
COL8A1-205ENST00000463753 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
COL8A1-205ENST00000463753 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
COL8A1-205ENST00000463753 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
COL8A1-205ENST00000463753 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
COL8A1-205ENST00000463753 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
COL8A1-205ENST00000463753 MT1XP80297 61 aa1.2□□□□□ -2.22
COL8A1-205ENST00000463753 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
COL8A1-205ENST00000463753 MT1BP07438 61 aa1.17□□□□□ -2.22
COL8A1-205ENST00000463753 PRM1P04553 51 aa1.15□□□□□ -2.22
COL8A1-205ENST00000463753 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
COL8A1-205ENST00000463753 LCE1CQ5T751 118 aa1.13□□□□□ -2.23
COL8A1-205ENST00000463753 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
COL8A1-205ENST00000463753 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
COL8A1-205ENST00000463753 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
COL8A1-205ENST00000463753 LCE3DQ9BYE3 92 aa1.1□□□□□ -2.23
COL8A1-205ENST00000463753 MT1GP13640 62 aa1.08□□□□□ -2.24
COL8A1-205ENST00000463753 KRTAP19-7Q3SYF9 63 aa1.06□□□□□ -2.24
COL8A1-205ENST00000463753 MT1LQ93083 61 aa1.05□□□□□ -2.24
COL8A1-205ENST00000463753 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
COL8A1-205ENST00000463753 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
COL8A1-205ENST00000463753 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
COL8A1-205ENST00000463753 MT1EP04732 61 aa1.01□□□□□ -2.25
COL8A1-205ENST00000463753 MT4P47944 62 aa0.99□□□□□ -2.25
COL8A1-205ENST00000463753 MUC19Q7Z5P9 8384 aa0.98□□□□□ -2.25
COL8A1-205ENST00000463753 MT1AP04731 61 aa0.97□□□□□ -2.25
COL8A1-205ENST00000463753 MT1MQ8N339 61 aa0.96□□□□□ -2.26
COL8A1-205ENST00000463753 KRTAP6-1Q3LI64 71 aa0.93□□□□□ -2.26
COL8A1-205ENST00000463753 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
COL8A1-205ENST00000463753 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
COL8A1-205ENST00000463753 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
COL8A1-205ENST00000463753 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 86 ms