RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 MT1EP04732 61 aa8.66□□□□□ -1.02
SSNA1-203ENST00000463511 K7ERS5 55 aa8.61□□□□□ -1.03
SSNA1-203ENST00000463511 TNP1P09430 55 aa8.55□□□□□ -1.04
SSNA1-203ENST00000463511 LCE1DQ5T752 114 aa8.55□□□□□ -1.04
SSNA1-203ENST00000463511 CDC42SE1Q9NRR8 79 aa8.47□□□□□ -1.05
SSNA1-203ENST00000463511 MT4P47944 62 aa8.41□□□□□ -1.06
SSNA1-203ENST00000463511 MT1GP13640 62 aa8.4□□□□□ -1.06
SSNA1-203ENST00000463511 KRTAP19-5Q3LI72 72 aa8.38□□□□□ -1.07
SSNA1-203ENST00000463511 LCE4AQ5TA78 99 aa8.38□□□□□ -1.07
SSNA1-203ENST00000463511 LCE3AQ5TA76 89 aa8.37□□□□□ -1.07
SSNA1-203ENST00000463511 HMCN1Q96RW7 5635 aa8.37□□□□□ -1.07
SSNA1-203ENST00000463511 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
SSNA1-203ENST00000463511 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
SSNA1-203ENST00000463511 MT1MQ8N339 61 aa8.29□□□□□ -1.08
SSNA1-203ENST00000463511 AHNAK2Q8IVF2 5795 aa8.23□□□□□ -1.09
SSNA1-203ENST00000463511 MT1LQ93083 61 aa8.2□□□□□ -1.1
SSNA1-203ENST00000463511 ROMO1P60602 79 aa8.17□□□□□ -1.1
SSNA1-203ENST00000463511 KRTAP5-10Q6L8G5 202 aa8.17□□□□□ -1.1
SSNA1-203ENST00000463511 KRTAP5-4Q6L8H1 288 aa8.15□□□□□ -1.1
SSNA1-203ENST00000463511 KRTAP4-3Q9BYR4 195 aa8.14□□□□□ -1.11
SSNA1-203ENST00000463511 KRTAP4-6Q9BYQ5 205 aa8.11□□□□□ -1.11
SSNA1-203ENST00000463511 BRK1Q8WUW1 75 aa8.06□□□□□ -1.12
SSNA1-203ENST00000463511 KRTAP23-1A1A580 65 aa8.05□□□□□ -1.12
SSNA1-203ENST00000463511 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
SSNA1-203ENST00000463511 KRTAP5-7Q6L8G8 165 aa7.9□□□□□ -1.14
SSNA1-203ENST00000463511 KRTAP5-3Q6L8H2 238 aa7.87□□□□□ -1.15
SSNA1-203ENST00000463511 KRTAP4-7Q9BYR0 210 aa7.81□□□□□ -1.16
SSNA1-203ENST00000463511 KRTAP20-2Q3LI61 65 aa7.74□□□□□ -1.17
SSNA1-203ENST00000463511 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
SSNA1-203ENST00000463511 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
SSNA1-203ENST00000463511 SPRR5A0A1B0GTR4 108 aa7.62□□□□□ -1.19
SSNA1-203ENST00000463511 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
SSNA1-203ENST00000463511 KRTAP19-4Q3LI73 84 aa7.6□□□□□ -1.19
SSNA1-203ENST00000463511 KRTAP12-4P60329 112 aa7.54□□□□□ -1.2
SSNA1-203ENST00000463511 LCE3CQ5T5A8 94 aa7.47□□□□□ -1.21
SSNA1-203ENST00000463511 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
SSNA1-203ENST00000463511 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
SSNA1-203ENST00000463511 SYNE1Q8NF91 8797 aaKnown RBP7.37□□□□□ -1.23
SSNA1-203ENST00000463511 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
SSNA1-203ENST00000463511 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
SSNA1-203ENST00000463511 KRTAP9-6A8MVA2 160 aa7.06□□□□□ -1.28
SSNA1-203ENST00000463511 KRTAP5-2Q701N4 177 aa7.06□□□□□ -1.28
SSNA1-203ENST00000463511 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.29
SSNA1-203ENST00000463511 KRTAP6-1Q3LI64 71 aa6.97□□□□□ -1.29
SSNA1-203ENST00000463511 MT1AP04731 61 aa6.96□□□□□ -1.3
SSNA1-203ENST00000463511 KRTAP5-8O75690 187 aa6.95□□□□□ -1.3
SSNA1-203ENST00000463511 MUC5ACP98088 5654 aa6.88□□□□□ -1.31
SSNA1-203ENST00000463511 AHNAKQ09666 5890 aaKnown RBP6.82□□□□□ -1.32
SSNA1-203ENST00000463511 MUC5BQ9HC84 5762 aaPredicted RBP6.79□□□□□ -1.32
SSNA1-203ENST00000463511 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
SSNA1-203ENST00000463511 KRTAP6-2Q3LI66 62 aa6.75□□□□□ -1.33
SSNA1-203ENST00000463511 OBSCNQ5VST9 7968 aa6.69□□□□□ -1.34
SSNA1-203ENST00000463511 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
SSNA1-203ENST00000463511 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
SSNA1-203ENST00000463511 KRTAP5-1Q6L8H4 278 aa6.42□□□□□ -1.38
SSNA1-203ENST00000463511 MT3P25713 68 aa6.37□□□□□ -1.39
SSNA1-203ENST00000463511 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
SSNA1-203ENST00000463511 LCE1EQ5T753 118 aa5.94□□□□□ -1.46
SSNA1-203ENST00000463511 KRTAP4-2Q9BYR5 136 aa5.71□□□□□ -1.5
SSNA1-203ENST00000463511 LCE1BQ5T7P3 118 aa5.7□□□□□ -1.5
SSNA1-203ENST00000463511 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
SSNA1-203ENST00000463511 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
SSNA1-203ENST00000463511 KRTAP4-12Q9BQ66 201 aa5.37□□□□□ -1.55
SSNA1-203ENST00000463511 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
SSNA1-203ENST00000463511 LCE3EQ5T5B0 92 aa5.23□□□□□ -1.57
SSNA1-203ENST00000463511 KRTAP5-11Q6L8G4 156 aa5.07□□□□□ -1.6
SSNA1-203ENST00000463511 LCE1FQ5T754 118 aa5.01□□□□□ -1.61
SSNA1-203ENST00000463511 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
SSNA1-203ENST00000463511 PHGR1C9JFL3 82 aa4.79□□□□□ -1.64
SSNA1-203ENST00000463511 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
SSNA1-203ENST00000463511 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
SSNA1-203ENST00000463511 INE1O15225 51 aa4.33□□□□□ -1.72
SSNA1-203ENST00000463511 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
SSNA1-203ENST00000463511 PRM1P04553 51 aa4.21□□□□□ -1.74
SSNA1-203ENST00000463511 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
SSNA1-203ENST00000463511 KRTAP21-1Q3LI58 79 aa3.62□□□□□ -1.83
SSNA1-203ENST00000463511 H3BS24 57 aa3.21□□□□□ -1.9
SSNA1-203ENST00000463511 MUC16Q8WXI7 14507 aa2.95□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 96.7 ms