RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
GARNL3-212ENST00000463005 A0A1B0GU33 70 aa3.45□□□□□ -1.86
GARNL3-212ENST00000463005 Q1T7F1 81 aa3.45□□□□□ -1.86
GARNL3-212ENST00000463005 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
GARNL3-212ENST00000463005 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
GARNL3-212ENST00000463005 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
GARNL3-212ENST00000463005 A8MU10 97 aa3.4□□□□□ -1.87
GARNL3-212ENST00000463005 UQCR11O14957 56 aa3.4□□□□□ -1.87
GARNL3-212ENST00000463005 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
GARNL3-212ENST00000463005 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
GARNL3-212ENST00000463005 SPRR2DP22532 72 aa3.38□□□□□ -1.87
GARNL3-212ENST00000463005 SPATA8Q6RVD6 105 aa3.38□□□□□ -1.87
GARNL3-212ENST00000463005 A0A0D9SG42 100 aa3.37□□□□□ -1.87
GARNL3-212ENST00000463005 A6NED7 52 aa3.37□□□□□ -1.87
GARNL3-212ENST00000463005 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
GARNL3-212ENST00000463005 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
GARNL3-212ENST00000463005 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
GARNL3-212ENST00000463005 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
GARNL3-212ENST00000463005 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
GARNL3-212ENST00000463005 K7ERS5 55 aa3.31□□□□□ -1.88
GARNL3-212ENST00000463005 MT1XP80297 61 aa3.3□□□□□ -1.88
GARNL3-212ENST00000463005 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
GARNL3-212ENST00000463005 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
GARNL3-212ENST00000463005 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
GARNL3-212ENST00000463005 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
GARNL3-212ENST00000463005 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
GARNL3-212ENST00000463005 BRK1Q8WUW1 75 aa3.22□□□□□ -1.89
GARNL3-212ENST00000463005 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
GARNL3-212ENST00000463005 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
GARNL3-212ENST00000463005 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
GARNL3-212ENST00000463005 TNP1P09430 55 aa3.08□□□□□ -1.92
GARNL3-212ENST00000463005 ROMO1P60602 79 aa3.06□□□□□ -1.92
GARNL3-212ENST00000463005 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
GARNL3-212ENST00000463005 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
GARNL3-212ENST00000463005 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
GARNL3-212ENST00000463005 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
GARNL3-212ENST00000463005 MT4P47944 62 aa2.96□□□□□ -1.94
GARNL3-212ENST00000463005 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
GARNL3-212ENST00000463005 MT1EP04732 61 aa2.95□□□□□ -1.94
GARNL3-212ENST00000463005 KTN1-AS1Q86SY8 53 aa2.94□□□□□ -1.94
GARNL3-212ENST00000463005 MT1GP13640 62 aa2.93□□□□□ -1.94
GARNL3-212ENST00000463005 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
GARNL3-212ENST00000463005 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
GARNL3-212ENST00000463005 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
GARNL3-212ENST00000463005 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
GARNL3-212ENST00000463005 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
GARNL3-212ENST00000463005 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
GARNL3-212ENST00000463005 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
GARNL3-212ENST00000463005 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
GARNL3-212ENST00000463005 MT1MQ8N339 61 aa2.83□□□□□ -1.96
GARNL3-212ENST00000463005 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
GARNL3-212ENST00000463005 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
GARNL3-212ENST00000463005 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
GARNL3-212ENST00000463005 MT1LQ93083 61 aa2.77□□□□□ -1.97
GARNL3-212ENST00000463005 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
GARNL3-212ENST00000463005 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
GARNL3-212ENST00000463005 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
GARNL3-212ENST00000463005 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
GARNL3-212ENST00000463005 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
GARNL3-212ENST00000463005 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
GARNL3-212ENST00000463005 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
GARNL3-212ENST00000463005 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
GARNL3-212ENST00000463005 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
GARNL3-212ENST00000463005 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
GARNL3-212ENST00000463005 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
GARNL3-212ENST00000463005 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-212ENST00000463005 MT1AP04731 61 aa2.37□□□□□ -2.03
GARNL3-212ENST00000463005 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
GARNL3-212ENST00000463005 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
GARNL3-212ENST00000463005 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
GARNL3-212ENST00000463005 INE1O15225 51 aa2.32□□□□□ -2.04
GARNL3-212ENST00000463005 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
GARNL3-212ENST00000463005 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
GARNL3-212ENST00000463005 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
GARNL3-212ENST00000463005 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
GARNL3-212ENST00000463005 PRM1P04553 51 aa1.58□□□□□ -2.16
GARNL3-212ENST00000463005 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
GARNL3-212ENST00000463005 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms