RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
CDC42BPA-210ENST00000462553 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
CDC42BPA-210ENST00000462553 A0A1B0GU69 56 aa3.03□□□□□ -1.92
CDC42BPA-210ENST00000462553 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
CDC42BPA-210ENST00000462553 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
CDC42BPA-210ENST00000462553 A8MU10 97 aa3□□□□□ -1.93
CDC42BPA-210ENST00000462553 TMEM258P61165 79 aa3□□□□□ -1.93
CDC42BPA-210ENST00000462553 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
CDC42BPA-210ENST00000462553 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CDC42BPA-210ENST00000462553 MT3P25713 68 aa2.99□□□□□ -1.93
CDC42BPA-210ENST00000462553 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
CDC42BPA-210ENST00000462553 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
CDC42BPA-210ENST00000462553 SMIM26A0A096LP01 95 aa2.97□□□□□ -1.93
CDC42BPA-210ENST00000462553 MT1EP04732 61 aa2.97□□□□□ -1.93
CDC42BPA-210ENST00000462553 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
CDC42BPA-210ENST00000462553 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
CDC42BPA-210ENST00000462553 C10orf95Q9H7T3 257 aa2.91□□□□□ -1.94
CDC42BPA-210ENST00000462553 MT4P47944 62 aa2.88□□□□□ -1.95
CDC42BPA-210ENST00000462553 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
CDC42BPA-210ENST00000462553 UQCR11O14957 56 aa2.86□□□□□ -1.95
CDC42BPA-210ENST00000462553 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
CDC42BPA-210ENST00000462553 MT1GP13640 62 aa2.85□□□□□ -1.95
CDC42BPA-210ENST00000462553 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
CDC42BPA-210ENST00000462553 MT1MQ8N339 61 aa2.84□□□□□ -1.95
CDC42BPA-210ENST00000462553 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
CDC42BPA-210ENST00000462553 TNP1P09430 55 aa2.83□□□□□ -1.96
CDC42BPA-210ENST00000462553 Q1T7F1 81 aa2.81□□□□□ -1.96
CDC42BPA-210ENST00000462553 MT1LQ93083 61 aa2.81□□□□□ -1.96
CDC42BPA-210ENST00000462553 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
CDC42BPA-210ENST00000462553 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CDC42BPA-210ENST00000462553 PSPHP1O15172 72 aa2.79□□□□□ -1.96
CDC42BPA-210ENST00000462553 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
CDC42BPA-210ENST00000462553 V9GYY9 64 aa2.78□□□□□ -1.96
CDC42BPA-210ENST00000462553 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
CDC42BPA-210ENST00000462553 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
CDC42BPA-210ENST00000462553 PCP4P48539 62 aa2.71□□□□□ -1.98
CDC42BPA-210ENST00000462553 KRTAP25-1Q3LHN0 102 aa2.71□□□□□ -1.98
CDC42BPA-210ENST00000462553 K7ERS5 55 aa2.69□□□□□ -1.98
CDC42BPA-210ENST00000462553 RPS28P62857 69 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-210ENST00000462553 A6NED7 52 aa2.68□□□□□ -1.98
CDC42BPA-210ENST00000462553 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
CDC42BPA-210ENST00000462553 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
CDC42BPA-210ENST00000462553 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-210ENST00000462553 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-210ENST00000462553 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
CDC42BPA-210ENST00000462553 CDC42SE1Q9NRR8 79 aa2.6□□□□□ -1.99
CDC42BPA-210ENST00000462553 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CDC42BPA-210ENST00000462553 ROMO1P60602 79 aa2.57□□□□□ -2
CDC42BPA-210ENST00000462553 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
CDC42BPA-210ENST00000462553 KRTAP12-4P60329 112 aa2.54□□□□□ -2
CDC42BPA-210ENST00000462553 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
CDC42BPA-210ENST00000462553 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-210ENST00000462553 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-210ENST00000462553 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
CDC42BPA-210ENST00000462553 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
CDC42BPA-210ENST00000462553 MT1AP04731 61 aa2.38□□□□□ -2.03
CDC42BPA-210ENST00000462553 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
CDC42BPA-210ENST00000462553 BRK1Q8WUW1 75 aa2.36□□□□□ -2.03
CDC42BPA-210ENST00000462553 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
CDC42BPA-210ENST00000462553 A0A0A0MQY5 61 aa2.27□□□□□ -2.05
CDC42BPA-210ENST00000462553 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
CDC42BPA-210ENST00000462553 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
CDC42BPA-210ENST00000462553 PRAC1Q96KF2 57 aa2.17□□□□□ -2.06
CDC42BPA-210ENST00000462553 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
CDC42BPA-210ENST00000462553 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
CDC42BPA-210ENST00000462553 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
CDC42BPA-210ENST00000462553 PRO0628Q9UI54 55 aa2.09□□□□□ -2.07
CDC42BPA-210ENST00000462553 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
CDC42BPA-210ENST00000462553 SVIPQ8NHG7 77 aa1.88□□□□□ -2.11
CDC42BPA-210ENST00000462553 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
CDC42BPA-210ENST00000462553 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
CDC42BPA-210ENST00000462553 LUZP6Q538Z0 58 aa1.73□□□□□ -2.13
CDC42BPA-210ENST00000462553 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
CDC42BPA-210ENST00000462553 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
CDC42BPA-210ENST00000462553 PRM1P04553 51 aa1.33□□□□□ -2.2
CDC42BPA-210ENST00000462553 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CDC42BPA-210ENST00000462553 INE1O15225 51 aa1.17□□□□□ -2.22
CDC42BPA-210ENST00000462553 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 100.1 ms